CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: GSA_SYNSC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9605) GN=hemL PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.974e-11 Identity = 53/163 (32.52%), Postives = 80/163 (49.08%), Query Frame = 2 Query: 5 RLYTGCNDIISLRNAYHGNA------AGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAH-GVVPDIVTMAKGIGNGIPLGA 472 R YTG + +I YHG+A AG+ AT V ++ + L PY + A ++A++ + +AG + E I G G I+ PG+L + + K+ G L + DEV GF + + G +AH GV PD+ TM K IG G+P+GA Sbjct: 129 RAYTGRDKVIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTA-PYNDL-EAVKALFAENPE---------AIAGVILEPIVGNAGFIQPEPGFLEGLRELTKEHGALLVFDEVMTGFRIS---YGGAQAHFGVTPDLTTMGKVIGGGLPVGA 277
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_BRUSU (Acetylornithine aminotransferase OS=Brucella suis GN=argD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.974e-11 Identity = 52/160 (32.50%), Postives = 68/160 (42.50%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG--------HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 II+ A+HG T+ A Q+ Y FG E + D + FG AG L E IQG GG+ +L V + + G L + DEVQ G RTG F E G+ PDI+ +AKGIG G P+GA + T Sbjct: 127 IITFEGAFHGRTLATIAAGGQAK------------------YLEGFGPKVEGF-----DQVPFGDEAALRAAITPETAGILLEPIQGEGGLRAFPEEFLRLVRQICDENGLLLLLDEVQTGVGRTGKLF-AHEWAGIRPDIMAIAKGIGGGFPIGACLAT 262
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_BRUME (Acetylornithine aminotransferase OS=Brucella melitensis GN=argD PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.974e-11 Identity = 52/160 (32.50%), Postives = 68/160 (42.50%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG--------HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 II+ A+HG T+ A Q+ Y FG E + D + FG AG L E IQG GG+ +L V + + G L + DEVQ G RTG F E G+ PDI+ +AKGIG G P+GA + T Sbjct: 127 IITFEGAFHGRTLATIAAGGQAK------------------YLEGFGPKVEGF-----DQVPFGDEAALRAAITPETAGILLEPIQGEGGLRAFPEEFLRLVRQICDENGLLLLLDEVQTGVGRTGKLF-AHEWAGIRPDIMAIAKGIGGGFPIGACLAT 262
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_BUCAP (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=argD PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.496e-11 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 23 NDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 N IIS N++HG T+ Q+ + P P + E+ V+ +ID T V E IQG GGI+ ++ + K L I DE+Q G RT S + +E + V PDI+T+AK +G+G P+ A +TT Sbjct: 132 NKIISFYNSFHGRTFFTVSVGGQAKYS---------DFFGPKPPAIMHAKFNEI--NSVKSIIDDNTCAVVM----ELIQGEGGIVPADVAFVREIRDLCYKYNALLIFDEIQTGIGRT-SKLYAYEHYEVQPDILTIAKSLGSGFPISATLTT 269
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: OAT_SCHPO (Probable ornithine aminotransferase OS=Schizosaccharomyces pombe GN=SPBC21C3.08c PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 52/155 (33.55%), Postives = 76/155 (49.03%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-GTSG-HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+S + +HG G + + + + N + P+ + GAD + +++DL + T G VA FL E IQG G++ GYL YK K L IADEVQ G ARTG E V PD+V + K I G+ P+ AV+++ Sbjct: 143 ILSCVDNFHGRTMGIISMSTDPDARDN------YGPYLPNVGPKISGADRVLRYNNIEDLKYYLDTFGPKVAAFLVEPIQGEAGVMVPDDGYLEEAYKLCKAHNVLFIADEVQTGVARTGKMLC-IEHSNVKPDVVILGKAISGGVYPVSAVLSS 290
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_GLOVI (Acetylornithine aminotransferase OS=Gloeobacter violaceus GN=argD PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.485e-11 Identity = 48/151 (31.79%), Postives = 70/151 (46.36%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAV 475 II ++HG T+ AT Q ++ F+ + G H PY D E V D A L E IQG GG++ + + + + L + DEVQ G RTG F G+E G+ PD+ T+AK +G G+P+GA+ Sbjct: 128 IICAHQSFHGRTMATVTATGQPKYQKHFHPLVPGFVHV----PYN-----DFEALRAQVTDA--------TAAVLIEPIQGEGGVVPGDVEFFQKLRRFCSERRILLMLDEVQTGMGRTGRLF-GYEHLGIEPDVFTLAKALGGGVPIGAL 260 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |