CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_METTH (Acetylornithine aminotransferase OS=Methanobacterium thermoautotrophicum GN=argD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.066e-17 Identity = 58/161 (36.02%), Postives = 81/161 (50.31%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR +TG ++II+ N++HG T+ AT Q + F + G H PY G GA + + A + E +QG GG+I GYL V + ++ L I DEVQ GF RTG+ F + GV PDI T+AK +G G P+GAV+ Sbjct: 116 ARKFTGKSEIIAAENSFHGRTLATVTATGQKKYSEPFRPLPEGFKHV----PY-GDIGAMADAVGDET------------AAIILEPVQGEGGVIIPPEGYLKDVQELARQNDVLLILDEVQTGFGRTGAMF-ASQLFGVEPDITTVAKAMGGGYPIGAVL 258
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_BACST (Acetylornithine aminotransferase OS=Bacillus stearothermophilus GN=argD PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 6.066e-17 Identity = 55/159 (34.59%), Postives = 80/159 (50.31%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR +TG + +I+ R ++HG TM AT Q VH P + + DV D + S VA + E +QG GG+ + P +L + ++ G L I DEVQ G RTG F ++ V PDI+T AKG+G+GIP+GA++ Sbjct: 106 ARKHTGRHKVITFRQSFHGRTFATMAATGQEK---------VHSGFGP-----LLPEFIHLPLNDV-DALKQAMSEEVAAVMLEVVQGEGGVRPVDPAFLQTASELCQQHGALLIIDEVQTGIGRTGKPF-AYQHFDVEPDIITAAKGLGSGIPVGAMI 248
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: GABT_MYCTU (4-aminobutyrate aminotransferase OS=Mycobacterium tuberculosis GN=gabT PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.923e-17 Identity = 63/169 (37.28%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQS---NWKFNVVQTGVHHALNPDPYRG-----VFGADGEMYAKDVQDLIDFGT-SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE--AHGVVPDIVTMAKGIGNGIPLGAV 475 AR YTG +++ +AYHG TM TA+S F ++ A PYR +GE+ A +ID + ++A + E IQG GG I A G+LPA+ +K + IADEVQ GFARTG+ F G+ PD++ AKGI +G+PL AV Sbjct: 137 ARSYTGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEIYRAPLSYPYRDGLLDKQLATNGELAAARAIGVIDKQVGANNLAALVIEPIQGEGGFIVPAEGFLPALLDWCRKNHVVFIADEVQTGFARTGAMFACEHEGPDGLEPDLICTAKGIADGLPLSAV 305
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: GABT_MYCBO (4-aminobutyrate aminotransferase OS=Mycobacterium bovis GN=gabT PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.923e-17 Identity = 63/169 (37.28%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQS---NWKFNVVQTGVHHALNPDPYRG-----VFGADGEMYAKDVQDLIDFGT-SGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFE--AHGVVPDIVTMAKGIGNGIPLGAV 475 AR YTG +++ +AYHG TM TA+S F ++ A PYR +GE+ A +ID + ++A + E IQG GG I A G+LPA+ +K + IADEVQ GFARTG+ F G+ PD++ AKGI +G+PL AV Sbjct: 137 ARSYTGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEIYRAPLSYPYRDGLLDKQLATNGELAAARAIGVIDKQVGANNLAALVIEPIQGEGGFIVPAEGFLPALLDWCRKNHVVFIADEVQTGFARTGAMFACEHEGPDGLEPDLICTAKGIADGLPLSAV 305
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_BACCR (Acetylornithine aminotransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=argD PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.035e-16 Identity = 55/161 (34.16%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR +TG + +++ + ++HG GTM AT Q K F + H P+ + + M + VA + E +QG GG+I + +L + K G L I DEVQ G RTG+ F +E G+ PDIVT+AK +GNGIP+GA++ Sbjct: 107 ARKHTGKSLVVTCQQSFHGRTFGTMSATGQDKVKEGFGPLLPSFLHI----PFNDIKALEEVM-------------NEEVAAVMVEVVQGEGGVIPVDLSFLKEIETLCNKFGSLFIIDEVQTGIGRTGTLF-AYEQVGIEPDIVTVAKALGNGIPVGAMI 249
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_PYRKO (Acetylornithine aminotransferase OS=Pyrococcus kodakaraensis GN=argD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.351e-16 Identity = 59/162 (36.42%), Postives = 83/162 (51.23%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVT 481 ARL TG ++I+++ NA+HG G++ AT + ++ F + G H P+ V A E K+ A + E IQG GGI+ ++ + + G L IADEVQ+G RTG F E +GV PDIVTM KGIGNG P+ +T Sbjct: 101 ARLATGRSEIVAMTNAFHGRTLGSLSATWKKKYREGFGPLVPGFKHI----PFNNVEAAK-EAITKET------------AAVIFEPIQGEGGIVPADEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAIEHYGVRPDIVTMGKGIGNGFPVSLTLT 243
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ERWCT (Putrescine aminotransferase OS=Erwinia carotovora subsp. atroseptica GN=patA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.305e-16 Identity = 60/154 (38.96%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+ ++ F + G HH FG D K VQ G VA + E IQG GG+I YLPAV + G L I DEVQ G RTG F E +GV PDI+ +AK +G G+ P+GA V T Sbjct: 174 IAATGAFHGKSLGALSATAKPAFRRPFMPLLPGFHHV--------AFG-DISAMRKQVQQCQKTGDD--VAAIILEPIQGEGGVIVPPENYLPAVRALCDEVGALLILDEVQTGMGRTGKMF-ACEHYGVQPDILCLAKALGGGVMPIGATVAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_PYRFU (Acetylornithine/acetyl-lysine aminotransferase OS=Pyrococcus furiosus GN=argD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.305e-16 Identity = 57/162 (35.19%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVT 481 ARLYTG +II++ NA+HG G + AT + ++ F + G H P+ V A + + A + E IQG GG++ ++ + + G L IADEVQ+G RTG F E + V PDIVTM KGIGNG+P+ +T Sbjct: 101 ARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFKPLVPGFKHI----PFNDVEAAKEAITTE-------------TAAVIFEPIQGEGGVVPANEEFVKTLRDLTEDKGALLIADEVQSGL-RTGK-FLAIEHYKVEPDIVTMGKGIGNGVPVSLTLT 243
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_PYRAB (Acetylornithine/acetyl-lysine aminotransferase OS=Pyrococcus abyssi GN=argD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.305e-16 Identity = 59/162 (36.42%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVT 481 ARLYTG +II++ NA+HG G + AT +S +K F + G H P+ V A + + A + E IQG GII ++ + + G L IADEVQ+G RTG F E + V PDIVT+ KGIGNG+P+ +T Sbjct: 101 ARLYTGRKEIIAMTNAFHGRTMGALSATWKSKYKKDFEPLVPGFKHI----PFNDVEAAKEAI-------------TRTTAAVIFEPIQGESGIIPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAVEHYKVEPDIVTLGKGIGNGVPVSLTLT 243
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_METMA (Acetylornithine aminotransferase OS=Methanosarcina mazei GN=argD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.305e-16 Identity = 54/158 (34.18%), Postives = 75/158 (47.47%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAV 475 AR+ TG + ++ +++HG G + T H ++ DP+ + D I S A + E IQG GG+ PGYL V + + G L I DEVQ GF RTG+ F E GV PDI++MAK IG G P+GA+ Sbjct: 128 ARVATGKSAFVAAEHSFHGRTIGALSVT--------------HKSMYRDPFMPPVSSKTSFVPYSDADAIRKAISEDTAAVVLEPIQGEGGVNVPDPGYLKEVREICDETGTLLIFDEVQTGFGRTGTWFCK-EQFGVEPDIMSMAKAIGGGFPMGAI 270 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |