CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_MYCBO (Acetylornithine aminotransferase OS=Mycobacterium bovis GN=argD PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.652e-14 Identity = 47/153 (30.72%), Postives = 71/153 (46.41%), Query Frame = 2 Query: 14 TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGA 472 TG +++ +A+HG G++ T Q P+ + G + DV D + H A E I G G++ GYL A + G L + DEVQ G RTG+ F+ + G+ PD+VT+AKG+G G+P+GA Sbjct: 127 TGRTKLVAAHDAFHGRTMGSLALTGQP--------------AKQTPFAPLPGDVTHVGYGDV-DALAAAVDDHTAAVFLEPIMGESGVVVPPAGYLAAARDITARRGALLVLDEVQTGMGRTGA-FFAHQHDGITPDVVTLAKGLGGGLPIGA 263
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ENT38 (Putrescine aminotransferase OS=Enterobacter sp. (strain 638) GN=patA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.158e-14 Identity = 57/154 (37.01%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G++ A T VA + E IQG GG+I GYLPAV K + L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA V T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PF-------GDINAMRTMLTECRKTGDDVAAVILEPIQGEGGVILPPLGYLPAVRKLCDEFDALLILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATVAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_LACPL (Acetylornithine aminotransferase OS=Lactobacillus plantarum GN=argD PE=3 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 2.158e-14 Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR YTG I++ ++++HG G M T + +Q G + L P + D + D I + +A + E +QG GG+ +L AV + G L I DEVQ G RTG +E +G+ PDI T+AKG+ NG+P+GA+V Sbjct: 105 ARKYTGKTGILAFQHSFHGRTYGAMSMTGNPH-----IQAG-YAPLVPGITFATYNDDAAL------DKI----TPELAAVILEVVQGEGGVFAGQTAWLQAVNAKCQATGVLLIIDEVQTGIGRTGYRM-AYEGYGLDPDIYTVAKGLANGLPVGAMV 246
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_AQUAE (Acetylornithine aminotransferase OS=Aquifex aeolicus GN=argD PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.158e-14 Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAK-----DVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 IS N++HG G++ AT Q + H P G YAK V L+D T AG + E IQG GG+ E + +L + + K+ L I DEVQ G RTG F+ ++ + PD++ +AKG+G G+P+GA++ Sbjct: 122 ISFENSFHGRTYGSLSATGQPKF---------HKGFEPL-------VPGFSYAKLNDIDSVYKLLDEET----AGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG-EFYAYQHFNLKPDVIALAKGLGGGVPIGAIL 254
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SHIFL (Putrescine aminotransferase OS=Shigella flexneri GN=patA PE=3 SV=5) HSP 1 Score: 77.7962 bits (190), Expect = 2.818e-14 Identity = 55/154 (35.71%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ +HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGVFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SHIF8 (Putrescine aminotransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=patA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.818e-14 Identity = 55/154 (35.71%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ +HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGVFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_THET8 (Acetylornithine/acetyl-lysine aminotransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=argD PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.818e-14 Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR +TG ++ + G G++ T + ++ + +P + D E + V + A + E +QG GG+ P +L A + ++ G L I DE+Q G RTG F FE G+VPDI+T+AK +G G+PLGA V Sbjct: 124 ARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPL-------VEPVEFIPYNDVEALKRAVDE--------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDILTLAKALGGGVPLGAAV 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_OCEIH (Acetylornithine aminotransferase OS=Oceanobacillus iheyensis GN=argD PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.818e-14 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 2 Query: 11 YTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYA----KDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 Y +II+ ++HG TM ATAQ +H P +G Y K+ ID +G + L E IQG GGI +L + K+A L + DE+Q G RTGS F ++ +G+ PD++T+AKG+G+G P+GA++ Sbjct: 122 YDDRTEIITFEQSFHGRTGSTMAATAQEK---------IHQGFTPL-------TEGFRYLPFNNKESLSEID---NGKTSAVLLEVIQGEGGIHTAEKDWLKQLAAICKQADILLMIDEIQTGIGRTGSLF-AYQPYGIEPDVITVAKGLGSGFPIGAML 261
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_BUCAI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=argD PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.818e-14 Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 2 Query: 23 NDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 N IIS N++HG T+ QS + F G+ HA D V++LID T V E IQG GG+I ++ A+ + K+ L I DE+Q G RTG F+ +E + + PDI+T+AK +G G P+ A++TT Sbjct: 132 NKIISFYNSFHGRTFFTVSVGGQSKYSNNFGPKPAGIVHASFND-------------INSVKNLIDHDTCAVVV----ELIQGEGGVIPANLTFVQALKELCKQYNVLLIFDEIQTGIGRTGKLFY-YEYYAITPDILTIAKSLGGGFPISAMLTT 269
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_BACHD (Diaminobutyrate--2-oxoglutarate transaminase OS=Bacillus halodurans GN=ectB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.680e-14 Identity = 59/165 (35.76%), Postives = 80/165 (48.48%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDF-------GTSGHV--AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIPL 466 AR TG DIIS N +HG G++ T S F G+ P V + + + D +D+ G SG A + E++QG GGI +L V K K+ G L I D+VQAG RTG+ F+ FE G+ PDIV ++K IG G+PL Sbjct: 125 ARKVTGRTDIISFTNGFHGMTIGSLSVTGNS---FKRKGAGI-------PLTNVVTMPYDNFVSESLDTLDYLERFLEDGGSGVEIPAAMILETVQGEGGINAARTEWLQRVEKICKRWGILLIIDDVQAGVGRTGT-FFSFEDAGITPDIVCLSKSIGGFGLPL 278 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |