CB250319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR1_SCLSC (Endo-polygalacturonase OS=Sclerotinia sclerotiorum GN=PG1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 53/164 (32.32%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 17 SAAGDS--PNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPGQ-ASGVKISDVIYQDIHGT---SATEVGV 487 ++AG+S NTD V +S+ +TI + + DDC+++ G T + C GHG+SIGS+G V +V + S T + NGVRIK+ + G + ++ ++ + + ++I+Q+Y +N + G+ SGV I+ V ++HGT SAT V V Sbjct: 190 NSAGNSLGHNTDAFDVGSSTDITISGANVQNQDDCLAINSG-TGITFTGGTCSGGHGLSIGSVGGRSDNV-VSDVIIESSTVKNSANGVRIKT-VLGATGSVSGVTYKDITLSGITSYGVVIEQDY--ENGSPTGKPTSGVPITGVTLSNVHGTVSSSATNVYV 348
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_VITVI (Probable polygalacturonase OS=Vitis vinifera GN=GSVIVT00026920001 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 58/222 (26.13%), Postives = 101/222 (45.50%), Query Frame = 2 Query: 2 QGVKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPG-----------ATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDV--KLIYKNQPAEASCANADGSASGFILPNSC 628 QG+ + A SPNTDGI+ + + I D I +GDDCV+V G L I + C + I +LG E G+Q+V + +++G+RIK+ G G+ ++I + M + + NY +N + I + Y+D+ + + + +L+ +P TGI + +V L K + +C + +G +SG + P C Sbjct: 236 QGITILAPVRSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPYSAVI-ALGSE-MSGGIQDVRAEDIVAINSESGIRIKT-GIGRGGYVKDIYVRGMTMKTMKWAFWMTGNYGSHADNHYDPKAFPVIQGINYRDMVAENVS-MAARLEGIPSDPFTGICISNVTIHLAAKAKKVPWTCTDVEGISSG-VTPTPC 452 The following BLAST results are available for this feature:
BLAST of CB250319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250319 ID=CB250319; Name=CB250319; organism=Citrus sinensis; type=EST; length=708bpback to top |