CB250321

Overview
NameCB250321
Unique NameCB250321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.573e-24
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 1
Query:    1 TMKDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            T  DEG++ALWRGNTANVIRYFPTQAL+FAF+D FK++F +KKD DGYWKW AGN             FVYSLDYA
Sbjct:   67 TTADEGVMALWRGNTANVIRYFPTQALNFAFRDKFKKMFGYKKDVDGYWKWMAGNLASGGAAGATSLLFVYSLDYA 142          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.332e-23
Identity = 48/76 (63.16%), Postives = 58/76 (76.32%), Query Frame = 1
Query:    1 TMKDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            T  +EG+++LWRGNTANV+RYFPTQAL+FAFKD FK++F +KK+RDGY KWFAGN             FVYSLDYA
Sbjct:   81 TAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYA 156          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.127e-22
Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = 1
Query:    1 TMKDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            T+++EG  +LWRGNTANVIRYFPTQAL+FAFKD FKR+F F KD++ YWKWFAGN             FVYSLDYA
Sbjct:   62 TVREEGFGSLWRGNTANVIRYFPTQALNFAFKDKFKRMFGFNKDKE-YWKWFAGNMASGGAAGAVSLSFVYSLDYA 136          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.378e-20
Identity = 46/76 (60.53%), Postives = 53/76 (69.74%), Query Frame = 1
Query:    1 TMKDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            T   EGIV+ WRGNTANV+RYFPTQAL+FAFKD  K L ++ ++RDGY KWFAGN             FVYSLDYA
Sbjct:   67 TATHEGIVSFWRGNTANVLRYFPTQALNFAFKDKIKSLLSYDRERDGYAKWFAGNLFSGGAAGGLSLLFVYSLDYA 142          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.351e-20
Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 1
Query:    1 TMKDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            T  DEG+ + WRGNTANVIRYFPTQAL+FAFKD  K +F FKK+ +GY KWFAGN             FVYSLDYA
Sbjct:   64 TAADEGVASFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKE-EGYAKWFAGNLASGGLAGGLSLLFVYSLDYA 138          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.010e-20
Identity = 46/76 (60.53%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    1 TMKDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            T K EG+++ WRGNTANVIRYFPTQAL+FAFKD  K +F FKK+ +GY KWFAGN             FVYSLD+A
Sbjct:   66 TAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKE-EGYGKWFAGNLASGGAAGALSLLFVYSLDFA 140          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.237e-20
Identity = 46/76 (60.53%), Postives = 53/76 (69.74%), Query Frame = 1
Query:    1 TMKDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            T   EG+++ WRGNTANVIRYFPTQAL+FAFKD  K +F FKK+ +GY KWFAGN             FVYSLDYA
Sbjct:   77 TATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKKE-EGYAKWFAGNLASGGAAGALSLLFVYSLDYA 151          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 2.974e-15
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            K++G+++ WRGN ANVIRYFPTQAL+FAFKD +K++F    D R  +W++FAGN             FVY LD+A
Sbjct:   63 KEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFA 137          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.974e-15
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            K++G+++ WRGN ANVIRYFPTQAL+FAFKD +K++F    D R  +W++FAGN             FVY LD+A
Sbjct:   63 KEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFA 137          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 2.974e-15
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            K++G+++ WRGN ANVIRYFPTQAL+FAFKD +K++F    D R  +W++FAGN             FVY LD+A
Sbjct:   63 KEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFA 137          
The following BLAST results are available for this feature:
BLAST of CB250321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ADT_NEUCR1.573e-2465.79ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT_SCHPO1.332e-2363.16ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT_CHLRE1.127e-2264.47ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]
ADT1_YEAST1.378e-2060.53ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT_KLULA2.351e-2061.84ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
ADT3_YEAST4.010e-2060.53ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]
ADT2_YEAST5.237e-2060.53ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
ADT3_BOVIN2.974e-1550.67ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT2_TACAC2.974e-1550.67ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
ADT2_RAT2.974e-1550.67ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0108 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ157 similar to adenine nucleotide translocator (acc# CAA05979), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250321 ID=CB250321; Name=CB250321; organism=Citrus sinensis; type=EST; length=230bp
ACAATGAAGGATGAGGGTATTGTTGCTTTGTGGAGAGGAAATACTGCTAA
TGTTATCCGTTACTTCCCCACTCAGGCCCTGGACTTTGCATTCAAGGATT
ACTTCAAGAGGCTCTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAA
TGGTTTGCTGGTAATTTGGGATCAGGAGGTGCTGCTGGTGCTTCATCCCT
TCTCTTTGTTTACTCTTTGGACTATGCTCG
back to top