CB250321

Overview
NameCB250321
Unique NameCB250321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT2_PONAB (ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.130e-14
Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            K++G+++ WRGN ANVIR+FPTQAL+FAFKD +K++F    D R  +W++FAGN             FVY LD+A
Sbjct:   63 KEQGVLSFWRGNLANVIRHFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFA 137          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT1_ANOGA (ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=AGAP006782 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.476e-14
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            K++GI A WRGN ANVIRYFPTQAL+FAFKD +K++F    D++  +W++F GN             FVY LD+A
Sbjct:   65 KEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLGSGGAAGATSLCFVYPLDFA 139          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT_DROME (ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14
Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            K++G  + WRGN ANVIRYFPTQAL+FAFKD +K++F    D++  +W++FAGN             FVY LD+A
Sbjct:   78 KEQGFSSFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFWRYFAGNLASGGAAGATSLCFVYPLDFA 152          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.288e-14
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            K++G+++LWRGN ANVIRYFPTQAL+FAFKD +K+ F     ++   K+F GN             FVY LD+A
Sbjct:   67 KEQGVISLWRGNLANVIRYFPTQALNFAFKDKYKKFFVRHTAKENPTKFFIGNLLSGGAAGATSLLFVYPLDFA 140          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.783e-13
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            +++G ++ WRGN ANVIRYFPTQAL+FAFKD +K+LF    +++  +W+WF  N              VY LD+A
Sbjct:   79 REQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFA 153          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT4_MOUSE (ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.635e-13
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            +++G ++ WRGN ANVIRYFPTQAL+FAFKD +K LF    +++  +W+WF  N              VY LD+A
Sbjct:   76 REQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFA 150          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT4_MACFA (ADP/ATP translocase 4 OS=Macaca fascicularis GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.635e-13
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            +++G  + WRGN ANVIRYFPTQAL+FAFKD +K+LF    +++  +W+WF  N              VY LD+A
Sbjct:   75 REQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFA 149          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT4_HUMAN (ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.635e-13
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            +++G  + WRGN ANVIRYFPTQAL+FAFKD +K+LF    +++  +W+WF  N              VY LD+A
Sbjct:   75 REQGFFSFWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFA 149          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.077e-12
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query:    7 KDEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRD-GYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            +++G  A WRGN ANVIRYFPTQAL+FAFKD +K++F    D++  + ++F GN             FVY LD+A
Sbjct:   65 REQGFSAFWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFTRYFIGNLASGGMAGATSLCFVYPLDFA 139          
BLAST of CB250321 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.855e-12
Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 1
Query:   10 DEGIVALWRGNTANVIRYFPTQALDFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYA 228
            ++G+ + WRGN ANV+RYFPTQA +FAFKD  K LF     +  +W++F  N              VY LD+A
Sbjct:   99 EQGVASFWRGNLANVVRYFPTQAFNFAFKDTIKGLFPKYSPKTDFWRFFVVNLASGGLAGAGSLLIVYPLDFA 171          
The following BLAST results are available for this feature:
BLAST of CB250321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ADT2_PONAB1.130e-1449.33ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 P... [more]
ADT1_ANOGA1.476e-1450.67ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=... [more]
ADT_DROME2.517e-1449.33ADP,ATP carrier protein OS=Drosophila melanogaster... [more]
ADT_DICDI3.288e-1448.65Mitochondrial substrate carrier family protein anc... [more]
ADT4_BOVIN2.783e-1345.33ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
ADT4_MOUSE3.635e-1345.33ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 ... [more]
ADT4_MACFA3.635e-1345.33ADP/ATP translocase 4 OS=Macaca fascicularis GN=SL... [more]
ADT4_HUMAN3.635e-1345.33ADP/ATP translocase 4 OS=Homo sapiens GN=SLC25A31 ... [more]
ADT2_ANOGA3.077e-1246.67ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]
ADT_CHLKE6.855e-1242.47ADP,ATP carrier protein OS=Chlorella kessleri PE=3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0108 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ157 similar to adenine nucleotide translocator (acc# CAA05979), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250321 ID=CB250321; Name=CB250321; organism=Citrus sinensis; type=EST; length=230bp
ACAATGAAGGATGAGGGTATTGTTGCTTTGTGGAGAGGAAATACTGCTAA
TGTTATCCGTTACTTCCCCACTCAGGCCCTGGACTTTGCATTCAAGGATT
ACTTCAAGAGGCTCTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAA
TGGTTTGCTGGTAATTTGGGATCAGGAGGTGCTGCTGGTGCTTCATCCCT
TCTCTTTGTTTACTCTTTGGACTATGCTCG
back to top