CB250323

Overview
NameCB250323
Unique NameCB250323
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length509
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6985 contig Csv1_Contig6985:646..1154. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: OYE3_YEAST (NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae GN=OYE3 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 6.824e-25
Identity = 58/132 (43.94%), Postives = 85/132 (64.39%), Query Frame = 1
Query:   73 LRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME-SGDSNPEALGLYM-----AESLNKYG--ILYCHMVEPRM 444
            L  D+I Q + D+  AA+N+I AG DG+E+H A+GYL++QF+    N RTD+YGG++ENR RF LE+V+A+   IG +RVG+RLSP+  +   SG + P  +  Y       E   K G  + + H+VEPR+
Sbjct:  162 LTKDDIKQYIKDYIHAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNKRTDEYGGTIENRARFTLEVVDALIETIGPERVGLRLSPYGTFNSMSGGAEPGIIAQYSYVLGELEKRAKAGKRLAFVHLVEPRV 293          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: OYE2_YEAST (NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae GN=OYE2 PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 6.824e-25
Identity = 59/136 (43.38%), Postives = 88/136 (64.71%), Query Frame = 1
Query:   61 PPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFA--NYMESG-DSNPEALGLYMAESLNKYG-----ILYCHMVEPRM 444
            P   +  DEI Q V ++  AA+N+I AG DG+E+H A+GYL++QF+    N+RTD+YGGS+ENR RF LE+V+AV + IG ++VG+RLSP+   N M  G ++   A   Y+   L +       + + H+VEPR+
Sbjct:  158 PQHSITKDEIKQYVKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNNRTDEYGGSIENRARFTLEVVDAVVDAIGPEKVGLRLSPYGVFNSMSGGAETGIVAQYAYVLGELERRAKAGKRLAFVHLVEPRV 293          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: KYE1_KLULA (Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.287e-23
Identity = 58/136 (42.65%), Postives = 84/136 (61.76%), Query Frame = 1
Query:   61 PPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANY-MESGDSNPEALG--LYMAESLNKYG-----ILYCHMVEPRM 444
            P   +  DEI Q + D+  AA+  I+AG DG+E+H A+GYL++QF+    N RTD+YGGS+ENR RF LE+V+AV + +GA+R  IR SP+  +   SG S+P  +    Y+   L K       + Y  +VEPR+
Sbjct:  157 PQHGITKDEIKQYIRDYVDAAKKCIDAGADGVEIHSANGYLLNQFLDPISNKRTDEYGGSIENRARFVLEVVDAVVDAVGAERTSIRFSPYGVFGTMSGGSDPVLVAQFAYVLAELEKRAKAGKRLAYVDLVEPRV 292          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: EBP1_CANAL (Probable NADPH dehydrogenase OS=Candida albicans GN=EBP1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.683e-21
Identity = 57/140 (40.71%), Postives = 89/140 (63.57%), Query Frame = 1
Query:   67 RRLRTDEIPQIVN-DFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYG-GSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESL-----NKYGILYCHMVEPRMKTVGEKS 465
            R L  +EI  IV  ++  AA++A+EAGFD +E+HGAHGYL+DQF+    N RTD+YG GS+ENR R  L +V+ +   +GA+R+ +RLSP+A++ +  +   E +  Y+ + L     N   + Y  +VEPR+  + + S
Sbjct:  168 RALTEEEIDHIVEVEYPNAAKHALEAGFDYVEIHGAHGYLLDQFLNLASNKRTDKYGCGSIENRARLLLRVVDKLIEVVGANRLALRLSPWASF-QGMEIEGEEIHSYILQQLQQRADNGQQLAYISLVEPRVTGIYDVS 306          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NADO_THEBR (NADH oxidase OS=Thermoanaerobacter brockii PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.280e-19
Identity = 55/125 (44.00%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   58 TPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD-RVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHM 429
            T PR L  +EI +I+  F  AA  A  A FDGIELHGAHGYLI QFM  + N R D+YGGS E R RF LEI+  +   +G D  +  R S    ++E G++  E  G  +A+ L + G+   H+
Sbjct:  135 TQPRELTINEIEEIIQKFVDAAVRAKGAMFDGIELHGAHGYLIGQFMSPRTNRRVDKYGGSFERRMRFPLEIIRRIKEAVGEDYPISFRFSA-DEFVEGGNTLEE--GKQIAKMLEEAGVHVLHV 256          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: OYEA_SCHPO (Putative NADPH dehydrogenase C5H10.04 OS=Schizosaccharomyces pombe GN=SPAC5H10.04 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.777e-18
Identity = 51/130 (39.23%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   85 EIPQIVNDFRLAARNAIE-AGFDGIELHGAHGYLIDQFMKDQVNDRTD-QYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY--GILYCHMVEPRMKTVGEK 462
            +I + + DF  AA  A+  A  DG+E+H  +G+L+D+F+     D+ D +Y GS+ENRCRF LE++EAV+ +IG +RVG R+SPF+ +M+  D     + +Y+   + K    + Y H +EPR    G K
Sbjct:  162 DIQEHIQDFVNAADLAVNIAKADGVEIHQVNGFLLDRFVLGGFGDQCDPEYRGSIENRCRFPLEVLEAVTRKIGQERVGYRISPFSGWMQKIDF--MEVNIYLMSEIAKRFPKLAYIHAIEPRKYWSGHK 289          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: YQIG_BACSU (Probable NADH-dependent flavin oxidoreductase yqiG OS=Bacillus subtilis GN=yqiG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.627e-18
Identity = 58/126 (46.03%), Postives = 68/126 (53.97%), Query Frame = 1
Query:   34 NGVDIAQFTPPRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEI-----GADRVGIRLSPFANYMESGDSNPEALGLYMAES 396
            NG  IA     R L  +E+  IV  F  A R AIEAGFDG+E+HGA+GYLI QF   + N RTD++GGS E R  F L IV+ V         GA  VG RLSP           PE  GL M E+
Sbjct:  131 NGKQIA-----RALTEEEVENIVKAFGEATRRAIEAGFDGVEIHGANGYLIQQFYSPKTNQRTDRWGGSDEKRLAFPLAIVDEVKKAASEHAKGAFLVGYRLSP---------EEPETPGLTMTET 242          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: NAMA_CLOAB (NADPH dehydrogenase OS=Clostridium acetobutylicum GN=namA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.237e-17
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAV 285
            P+ L  +EI +I+  F+ AA+ A +AGFD IE+HGAHGYLI+QF+    N R D+YGGS ENR RF  E++EAV
Sbjct:  129 PKELTKNEIKEIILAFKAAAKRAEKAGFDAIEIHGAHGYLINQFLSPLSNFRDDEYGGSTENRTRFLKEVLEAV 202          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: BAICD_EUBSP (Bile acid-inducible operon protein CD OS=Eubacterium sp. (strain VPI 12708) GN=baiCD PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.237e-17
Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGAD 306
            P  L  + I +IV +F   AR A++AGFD +E H AH YL  +F+   +N RTD+YGGS ENRCRF  E+V+A+ + I  D
Sbjct:  122 PDTLTVERIHEIVEEFGRGARMAVQAGFDAVEFHAAHSYLPHEFLSPGMNKRTDEYGGSFENRCRFCYEVVQAIRSNIPDD 202          
BLAST of CB250323 vs. ExPASy Swiss-Prot
Match: FADH_ECOLI (2,4-dienoyl-CoA reductase [NADPH] OS=Escherichia coli (strain K12) GN=fadH PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 1.524e-16
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1
Query:   64 PRRLRTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGYLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMA 390
            P  L  +EI Q++++F   A+ A EAG+DG+E+ G+ GYLI++F+  + N R+DQ+GG   NR RFA+E+V AV   +G D + I      + +E G +  E + L  A
Sbjct:  129 PHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQA 237          
The following BLAST results are available for this feature:
BLAST of CB250323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
OYE3_YEAST6.824e-2543.94NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae ... [more]
OYE2_YEAST6.824e-2543.38NADPH dehydrogenase 2 OS=Saccharomyces cerevisiae ... [more]
KYE1_KLULA1.287e-2342.65Enoate reductase 1 OS=Kluyveromyces lactis GN=KYE1... [more]
EBP1_CANAL2.683e-2140.71Probable NADPH dehydrogenase OS=Candida albicans G... [more]
NADO_THEBR3.280e-1944.00NADH oxidase OS=Thermoanaerobacter brockii PE=1 SV... [more]
OYEA_SCHPO2.777e-1839.23Putative NADPH dehydrogenase C5H10.04 OS=Schizosac... [more]
YQIG_BACSU3.627e-1846.03Probable NADH-dependent flavin oxidoreductase yqiG... [more]
NAMA_CLOAB5.237e-1755.41NADPH dehydrogenase OS=Clostridium acetobutylicum ... [more]
BAICD_EUBSP5.237e-1748.15Bile acid-inducible operon protein CD OS=Eubacteri... [more]
FADH_ECOLI1.524e-1639.452,4-dienoyl-CoA reductase [NADPH] OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionEST0110 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ159 similar to 12-phytodienoate reductase OPR2 (acc# NP_177795), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250323 ID=CB250323; Name=CB250323; organism=Citrus sinensis; type=EST; length=509bp
ACAGACAAGCCATTGACCCCTCAAATCCGCGCTAATGGTGTTGATATTGC
ACAATTCACTCCTCCAAGGCGGCTAAGGACAGATGAAATCCCTCAAATTG
TGAATGATTTCAGGCTTGCTGCAAGAAACGCAATTGAGGCTGGTTTTGAT
GGCATTGAGCTCCACGGTGCACATGGCTACCTAATTGACCAATTTATGAA
GGATCAAGTGAATGATCGAACAGACCAGTATGGAGGATCCTTAGAGAATC
GTTGCCGTTTTGCTTTAGAAATAGTTGAAGCTGTTTCCAATGAAATAGGG
GCAGATAGGGTTGGGATAAGACTATCTCCGTTTGCAAACTATATGGAATC
AGGAGACTCTAACCCAGAAGCTTTAGGTCTTTACATGGCAGAATCCTTGA
ACAAATATGGTATCCTCTATTGTCACATGGTTGAGCCAAGGATGAAAACA
GTTGGAGAAAAATCTGAATGTCCTCACAGTTTGCTGCCCATGAGGAAGGC
TTTCAAGGG
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