CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.179e-29
Identity = 77/213 (36.15%), Postives = 112/213 (52.58%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSD-----FLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            +LVY++M NG L  HL+  K++D      L WK R +I +G+ARGL YLH      IIH D+K  NILLD     KVSDFGL+K    +   V T ++G+ GYL PE      +T K+DVYS+G++L+E +  R         +      +A     +G  L  ++DP++ G   +  L +    A  C+ +    RP MG V+  LE  L +
Sbjct:  595 ILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGM-LEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQL 806          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.179e-29
Identity = 85/226 (37.61%), Postives = 117/226 (51.77%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDF--LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFF--PSWAAKQIVEGSNLISLLDP--RLEGNA---DEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIP 651
            + R LVYD+M NG+LD HLF   ++    L W  R  I L  A+GLAYLH   +  I H DIK  NILLD +   +V+DFGLAK      S + T + GT GYLAPE      +T K+DVYS+G+++ E + GR+    S  G    F    WA   +  G    +L     R EG+     +  + R   V   C       RP++   +++LEG  D+ +PPIP
Sbjct:  366 SQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLEG--DIEVPPIP 589          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29
Identity = 73/213 (34.27%), Postives = 116/213 (54.46%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAK-LVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTL 639
            ++LVY+++  GSL  HL+  +     L+W +R ++A+  A+GL YLH      IIH D+K  NILLD +   KVSDFGL+K     + S + T ++GT GYL PE  S + +T K+DVYS+G++L E + GR     S          WA   +  G+    ++D  L+   D   + +  ++A  C+  D + RPS+ +V+  L+    + L
Sbjct:  675 QILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGA--FEIVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLKEAYSLQL 885          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29
Identity = 76/207 (36.71%), Postives = 113/207 (54.59%), Query Frame = 1
Query:   13 LVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL--VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVL 627
            L+Y++MPNG L  HL  +     L W++R +I L  A GL YLH  C   ++H DIK  NILLD     K++DFGL++   +G E   V T + GT GYL PE      +T K+D+YS+G++L E +S R   Q+S +        W +  I +G +L S++DP L  + D   + +   +A  C+      RP+M +VV  L+  L
Sbjct:  648 LIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNE-KNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQSREKP--HIVEWVSFMITKG-DLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVVNELKECL 850          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.070e-29
Identity = 75/205 (36.59%), Postives = 111/205 (54.15%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKD-SDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGR-EFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            RLLVY++  NG+L   L ++ +    L W TR  +ALG AR L YLHE C   IIH + K  N+LLD +    VSD GLA L+     S++   +    GY APE  SG+  T ++DVYS+G+++ E ++GR +         +F   WA  Q+ +   L  ++DP L G    + L+   ++   C+Q +   RP M +VVQ L
Sbjct:  556 RLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEFDSGI-YTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVVQDL 759          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.054e-28
Identity = 79/222 (35.59%), Postives = 119/222 (53.60%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSD---FLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRV-LTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL---------------EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            RLLVY+FM  GSL+  L   +  +    L W+ R +IA G A+GL +LH  C   IIH D+K  N+LLD +   +VSDFG+A+L+    + + ++T+ GT GY+ PE       TAK DVYS G+++ E +SG+R + + E G       W+  +  EG ++  ++D  L               EG    +E+ R   +A  C+ D  + RP+M QVV  L
Sbjct:  907 RLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDTNLV-GWSKMKAREGKHM-EVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASL 1126          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 79/210 (37.62%), Postives = 114/210 (54.29%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREF--SRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            +LVY++M NG+L SHL+       L WK R +I +G+ARGL YLH      +IH D+K  NILLD     KV+DFGL+K  G E   + V T ++G+ GYL PE      +T K+DVYS+G++++E +  R     +   ++     WA K   +G  L  ++DP L G    + L +       C+ D    RPSMG V+  LE  L +
Sbjct:  552 ILVYEYMENGTLKSHLYGSGLLS-LSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSK-TGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKG-QLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYALQL 758          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 77/218 (35.32%), Postives = 121/218 (55.50%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHL----FTEKDSDF----LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERI-SGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            T +L++ +F+PNGSL  +L    F    S +    L+W  R+QIALGTA+ L++LH  C+  I+H ++K  NILLD  +  K+SD+GL K +    S  LT       GY+APE     +  + K DVYSYG++L E V+GR+  +   + +V     +  + ++E  +     D RL    +E EL ++  +   C  ++   RPSM +VVQ+LE +
Sbjct:  661 TMQLILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLILRDY-VRDLLETGSASDCFDRRLR-EFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVLESI 876          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 72/208 (34.62%), Postives = 126/208 (60.58%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVG--REFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            +LLVY++MPNGSL   L + K    L W+TR++I L  A GL+YLH      I+H DIK  NIL+D ++  +V+DFG+AK V    +  + ++ + G+ GY+APE    + +  K+D+YS+G+++ E V+ R+   + E G+ +    W    + +   +  ++DP+L+ +  +EE++++ NV   C      +RPSM +VV++L+ +
Sbjct:  760 KLLVYEYMPNGSLGDLLHSSKGG-MLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVT-RKRPVDPELGE-KDLVKWVCSTL-DQKGIEHVIDPKLD-SCFKEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEI 962          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.798e-28
Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL--VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVL 627
            +L+Y++M NG+L  HL  E     L W+ R +IA  TA+GL YLH  C+  +IH DIK  NILLD  F  K+ DFGL++   VG E + V T + G+ GYL PE      +T K+DV+S+G++L E ++ +    ++ +        W   ++  G ++ +++DP + G+ D   L +   +A  C+    + RP+M QV   L+  L
Sbjct:  661 VLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSE-THVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKS--HIGEWVGFKLTNG-DIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQECL 864          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
Y5613_ARATH6.179e-2936.15Probable receptor-like protein kinase At5g61350 OS... [more]
Y1105_ARATH6.179e-2937.61Probable receptor-like protein kinase At1g11050 OS... [more]
Y5487_ARATH8.070e-2934.27Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH8.070e-2936.71Probable leucine-rich repeat receptor-like protein... [more]
SRF3_ARATH8.070e-2936.59Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
BRL2_ARATH1.054e-2835.59Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y5597_ARATH1.377e-2837.62Probable receptor-like protein kinase At5g59700 OS... [more]
Y1124_ARATH1.377e-2835.32Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH1.377e-2834.62Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y4245_ARATH1.798e-2835.10Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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