CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.424e-33
Identity = 82/207 (39.61%), Postives = 124/207 (59.90%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDS-DFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAK--LVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILE 618
            RLLVY+FM  GSL++HLF        L W TR ++ALG ARGLA+LH   +  +I+ D K  NILLD+ +  K+SDFGLA+   +G + S V T + GT+GY APE ++   ++ K+DVYS+G++L E +SGRR   +++         WA   +     L+ ++DPRL+G        ++  +A  CI  D   RP+M ++V+ +E
Sbjct:  147 RLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMG-DNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME 351          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.424e-33
Identity = 87/224 (38.84%), Postives = 134/224 (59.82%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLF-----TEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMR--GTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG---VLDVTLPP 645
            ++LV++F+PN SLD  LF     T+K    LDW  RY I  G  RGL YLH+  R  IIH DIK  NILLDA+  PK++DFG+A+   R+     +T R  GT GY+ PE ++    + K+DVYS+G+++ E VSGR+NS   + DG V    ++  +     S+L  L+DP + G+ +++E+ R  ++   C+Q++  +RP++  + Q+L      L+V  PP
Sbjct:  415 KILVFEFVPNKSLDYFLFGSTNPTKKGQ--LDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNF-RDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYVWRLWNTDSSL-ELVDPAISGSYEKDEVTRCIHIGLLCVQENPVNRPALSTIFQMLTNSSITLNVPQPP 634          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.424e-33
Identity = 84/217 (38.71%), Postives = 122/217 (56.22%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLV--GREFS-RVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDG--KVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            RLLVY+F+ N SLD  +F  +    LDW  RY++  G ARGL YLHE  R  IIH D+K  NILLD E  PK++DFGLAKL   G+  + R  + + GT GY+APE       + K DV+S+G+++ E ++G+RN+    +G        SW  +   E   ++S++DP L   +   E+ R  ++   C+Q+    RP+M  V  +L      TLP
Sbjct:  426 RLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGKRNNNGGSNGDEDAEDLLSWVWRSWRE-DTILSVIDPSLTAGS-RNEILRCIHIGLLCVQESAATRPTMATVSLMLNS-YSFTLP 639          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.166e-33
Identity = 83/208 (39.90%), Postives = 118/208 (56.73%), Query Frame = 1
Query:    4 SRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGR-EFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            +RLL+YD+MPNGSL S L  E+    LDW  RY+I LG A+GLAYLH  C   I+H DIK  NIL+  +F P ++DFGLAKLV   +  R   T+ G+ GY+APE    + IT K+DVYSYG+++ E ++G++    +    +     W  +       L S L  R E  AD  E+ ++   A  C+      RP+M  V  +L+ +
Sbjct:  863 TRLLMYDYMPNGSLGS-LLHERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLV-DWVRQNRGSLEVLDSTLRSRTEAEAD--EMMQVLGTALLCVNSSPDERPTMKDVAAMLKEI 1066          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.135e-33
Identity = 84/210 (40.00%), Postives = 115/210 (54.76%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRR-----NSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILE 618
            RLL+Y FM NGSLD  L    D +  L W  R +IA G ARGLAYLH+ C   +IH D+K  NILLD +F   ++DFGLA+L+    + V T + GT GY+ PE    +  T + DVYS+G++L E V+GRR       +   D   R F   A K+  E      L+D  +  N +E  +  +  +AC CI  +   RP + +VV  LE
Sbjct:  823 RLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRRPVEVCKGKSCRDLVSRVFQMKAEKREAE------LIDTTIRENVNERTVLEMLEIACKCIDHEPRRRPLIEEVVTWLE 1026          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.401e-33
Identity = 85/224 (37.95%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL-VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPRALQVMVDD 678
            ++VY++M  G+L  HL+   D   L W+ R +I +G ARGL YLH      IIH D+K  NILLD  F  KV+DFGL+K     + + V T ++G+ GYL PE ++   +T K+DVYS+G+++ E V GR     S   +      WA K + +G  L  ++DP L G    EE+ + C V   C+  +   RP+MG ++  LE +L V       A   MVDD
Sbjct:  557 IIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKG-KLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLEFMLQVQAKDEKAA---MVDD 776          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.401e-33
Identity = 83/225 (36.89%), Postives = 121/225 (53.78%), Query Frame = 1
Query:   13 LVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAK--LVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPRALQVMVDDH 681
            L+Y++M NG L  HL  +     L+W TR QIA+  A GL YLH  C+  ++H D+K  NILLD EF  K++DFGL++   VG + S+V T + GT GYL PE      ++ K+DVYS+G++L E ++ +R   ++ +        W    I +G +   ++DP+L GN D   + R   VA  C       RP+M QV+  L+  L      I R  Q M   H
Sbjct:  637 LIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQTRENP--NIAEWVTFVIKKG-DTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLKECLASENTRISRNNQNMDSGH 858          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.401e-33
Identity = 76/219 (34.70%), Postives = 127/219 (57.99%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTT-MRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQ--ESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQV-VQILEGVLDVTLPPIP 651
            R+LVY+++ N SLD+ LF       L W  RY I  G ARG+ YLH+  R  IIH D+K  NILLDA+  PK++DFG+A++ G + ++  T+ + GT GY++PE       + K+DVYS+G+++ E +SGR+N+   E++D +     +W   ++      + L+DP +  +  + E+ R  ++   C+Q+D   RP+M  + V +    + +  P  P
Sbjct:  405 RILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAW---RLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVMLTSNTMALPAPQQP 620          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.401e-33
Identity = 82/217 (37.79%), Postives = 122/217 (56.22%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFS---RVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGR--RNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            R+LVY+F+ N SLD+ +F  K    LDW  RY++  G ARGL YLHE  R  IIH D+K  NILLD E  PK++DFGLAKL   + +   R  + + GT GY+APE       + K DV+S+G+++ E ++G+   N + ++D +     SW  +   E   ++S++DP L       E+ R  ++   C+Q+    RP+M  V  +L      TLP
Sbjct:  430 RILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGKGNNNGRSNDDEEAENLLSWVWRCWRE-DIILSVIDPSLT-TGSRSEILRCIHIGLLCVQESPASRPTMDSVALMLNS-YSYTLP 643          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.401e-33
Identity = 79/218 (36.24%), Postives = 122/218 (55.96%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTT-MRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG---VLDVTLPP 645
            ++LVY+F+PN SLD  LF       LDW  RY I  G  RG+ YLH+  R  IIH D+K  NILLDA+  PK+ DFG+A+    + +   T  + GT GY+ PE ++    + K+DVYS+G+++ E + G++NS  +E DG +    ++  + +     L+ L+D  +  N D  E+ R  ++   C+Q++   RP+M  V  +L      L V  PP
Sbjct:  381 KILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLVTYVWR-LWNNEPLLELVDAPMGENYDRNEVIRCIHIGLLCVQENPADRPTMSTVFHMLTNTSITLHVPQPP 597          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
NAK_ARATH2.424e-3339.61Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK30_ARATH2.424e-3338.84Putative cysteine-rich receptor-like protein kinas... [more]
CRK29_ARATH2.424e-3338.71Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
RCH2_ARATH3.166e-3339.90Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PSKR2_ARATH4.135e-3340.00Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
Y2393_ARATH5.401e-3337.95Probable receptor-like protein kinase At2g39360 OS... [more]
MEE39_ARATH5.401e-3336.89Probable LRR receptor-like serine/threonine-protei... [more]
CRK7_ARATH5.401e-3334.70Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK28_ARATH5.401e-3337.79Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK24_ARATH5.401e-3336.24Cysteine-rich receptor-like protein kinase 24 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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