CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3470 contig Csv1_Contig3470:152..923. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.054e-33
Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSD-FLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            +LL+Y +M NGSLD  L  + D    LDWKTR +IA G A GLAYLH+ C   I+H DIK  NILL   F   ++DFGLA+L+    + V T + GT GY+ PE       T K DVYS+G++L E ++GRR     +    R   SW  +   E      + DP +      EE+  +  +AC C+ ++   RP+  Q+V  LE +
Sbjct:  812 KLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTE-KRESEIFDPFIYDKDHAEEMLLVLEIACRCLGENPKTRPTTQQLVSWLENI 1017          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.212e-33
Identity = 76/207 (36.71%), Postives = 122/207 (58.94%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDS--HLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNAD--EEELARLCNVACWCIQDDETHRPSMGQVVQILE 618
            +L+Y++MPNGSLD   H   +  +   +W   YQIA+G A+G+ YLH  C   I+H D+KP NILLDA+F  +V+DFG+AKL+  + S  ++ + G+ GY+APE    + +  K+D+YSYG++L E ++G+R S E E G+      W   ++    ++  +LD  +  +     EE+ ++  +A  C     T RP M  V+ IL+
Sbjct:  795 MLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKR-SVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQ 998          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.212e-33
Identity = 87/219 (39.73%), Postives = 121/219 (55.25%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG----VLDVTLPPIP 651
            R++V D + NGSL  HLF + ++  L W  R +IALG ARGLAYLH   +  IIH DIK  NILLD  F  KV+DFGLAK      + + T + GT GY+APE      +T K+DVYS+G++L E +S R+     E+G+      WA   + EG  L  +++  +      E L +   +A  C       RP+M QVV++LE     V+ +   PIP
Sbjct:  357 RIIVCDLVSNGSLHDHLFGDLEAQ-LAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTL-DVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLESNEFTVIAIPQRPIP 573          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.212e-33
Identity = 79/206 (38.35%), Postives = 113/206 (54.85%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFT--EKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            LL+YD++PNGSLDS L+T   +    L W  R+QIA G A GL YLHE+    +IH D+KP N+L+D++  P++ DFGLA+L  R      T + GT GY+APE       ++ +DV+++G++L E V GR+ +    D    F   W  +    G  ++S +DPRL    D  E      V   C       RPSM  V++ L G
Sbjct:  437 LLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPT----DSGTFFLVDWVMELHANG-EILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNG 637          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.203e-32
Identity = 81/213 (38.03%), Postives = 112/213 (52.58%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLV------GREFSRVLT--TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADE--EELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            +LL YD++PNGSL S L        +DW+ RY + LG A  LAYLH  C   IIH D+K  N+LL   F P ++DFGLA+ +      G + ++      M G+ GY+APE  S   IT K+DVYSYG++L E ++G+        G       W    + E  +   LLDPRL+G  D    E+ +   VA  C+ +    RP M  VV +L
Sbjct:  827 KLLFYDYLPNGSLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLV-KWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAML 1038          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.203e-32
Identity = 82/221 (37.10%), Postives = 126/221 (57.01%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFT-EKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMR--GTRGYLAPE-RISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPRAL 660
            LLV +++PNG+L S L   E  +  L W  RY+I LGTA+GLAYLH   R   IH ++KP NILLD +  PK+SDFGL++L+  +    +   R     GY+APE     + +  K DVY +G+++ E V+GRR  +  ED  V    S   + ++E  N++  +DP +E    E+E+  +  +A  C     ++RP+M ++VQIL+    V   P+P  +
Sbjct:  798 LLVSEYIPNGNLQSKLHEREPSTPPLSWDVRYKIILGTAKGLAYLHHTFRPTTIHFNLKPTNILLDEKNNPKISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYGEDSFV--ILSDHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQILQ----VINSPVPHRI 1012          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.203e-32
Identity = 84/215 (39.07%), Postives = 124/215 (57.67%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL-EGVLDVTLPPI 648
            +LVY+F+PN SLD  +F E+    L W  R +I  G ARGL YLHE  +  IIH D+K  NILLDA   PKV+DFG+A+L   + +R +T  + GT GY+APE +     + K DVYS+G++L E ++GR N    E       P++A K  V G    S++D  L   +   E+ R  ++   C+Q++ + RP+M  V+Q L    + + LP +
Sbjct:  409 ILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGRSNKNYFE---ALGLPAYAWKCWVAG-EAASIIDHVL-SRSRSNEIMRFIHIGLLCVQENVSKRPTMSLVIQWLGSETIAIPLPTV 618          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.203e-32
Identity = 82/209 (39.23%), Postives = 122/209 (58.37%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLF---TEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRV-LTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL-EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILE 618
            RLLVY++M  GSL++ L    ++K   +L+W  R +IA+G ARGLA+LH  C   IIH D+K  N+LLD +F  +VSDFG+A+LV    + + ++T+ GT GY+ PE       TAK DVYSYG++L E +SG++     E G+      W AKQ+        +LDP L    + + EL     +A  C+ D    RP+M Q++ + +
Sbjct:  928 RLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGW-AKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFK 1135          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.203e-32
Identity = 85/212 (40.09%), Postives = 126/212 (59.43%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDF--LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAK--LVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLD 630
            RLLVY+FM  GSL++HLF  + + F  L W  R  +AL  A+GLA+LH      +I+ DIK  NILLDA++  K+SDFGLA+   +G + S V T + GT GY APE +S   + A++DVYS+G++L E +SG+R    +   K      WA   +     ++ ++D RL+     EE  R+ +VA  C+  +   RP+M QVV+ L+ + D
Sbjct:  146 RLLVYEFMQKGSLENHLF-RRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVK-VIYRDIKASNILLDADYNAKLSDFGLARDGPMG-DLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQLQD 354          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.571e-32
Identity = 80/207 (38.65%), Postives = 116/207 (56.04%), Query Frame = 1
Query:    4 SRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADE---EELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            S LL+Y++M  GSL   L   K S  +DW TR+ IALG A GLAYLH  C+  IIH DIK  NIL+D  F   V DFGLAK++    S+ ++ + G+ GY+APE    + +T K D+YS+G++L E ++G+   Q  E G      +W    I + S    +LDP L    D+     +  +  +A  C +   + RP+M +VV +L
Sbjct:  896 SNLLLYEYMSRGSLGELLHGGK-SHSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQG--GDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLML 1099          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
PSKR1_DAUCA7.054e-3339.13Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y5148_ARATH9.212e-3336.71Probable leucine-rich repeat receptor-like protein... [more]
RKF3_ARATH9.212e-3339.73Probable LRR receptor-like serine/threonine-protei... [more]
LRKA1_ARATH9.212e-3338.35Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y4265_ARATH1.203e-3238.03Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH1.203e-3237.10Probably inactive leucine-rich repeat receptor-lik... [more]
CRK38_ARATH1.203e-3239.07Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
BRL1_ARATH1.203e-3239.23Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BIK1_ARATH1.203e-3240.09Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y2317_ARATH1.571e-3238.65Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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