CB250329

Overview
NameCB250329
Unique NameCB250329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.585e-84
Identity = 140/171 (81.87%), Postives = 155/171 (90.64%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF PAIVVPG+Y S+DKLLQTRIFSY+D QRHRLGPNYLQLPVNAPKCA HNNH++GFMNFMHRDEE++YFPSR+DP RHAE +P PP +  G+R+KCII KENNF QPGERYRSWAPDRQERFICRWVDALSDPRVTHEIR IW SYWSQA K+LGQK+ASRLNVRP +
Sbjct:  322 LAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.122e-83
Identity = 140/170 (82.35%), Postives = 153/170 (90.00%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            LAFCPAI+VPGIYYS+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNHYDGFMNFMHRDEEIDYFPSRYDP RHAE +P PP    G+R+KC+I KENNF QPGERYRS++PDRQERFI R V  LSDPRVTHE+R IW+SYWSQA KSLGQK+ASRLNV+PN
Sbjct:  322 LAFCPAIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_ARATH (Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=3)

HSP 1 Score: 307.76 bits (787), Expect = 3.620e-83
Identity = 140/170 (82.35%), Postives = 155/170 (91.18%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            +AFCPA+VVPGI+YS+DKLLQTRIFSYAD+QRHRLGPNYLQLPVNAPKCA HNNH+DGFMNFMHRDEE++YFPSR DPVRHAE +PT P +C G REKC I KENNF QPGERYRSW  DRQERF+ R+V+ALS+PRVTHEIR IWISYWSQA KSLGQKLA+RLNVRPN
Sbjct:  322 IAFCPALVVPGIHYSDDKLLQTRIFSYADSQRHRLGPNYLQLPVNAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRLDPVRHAEKYPTTPIVCSGNREKCFIGKENNFKQPGERYRSWDSDRQERFVKRFVEALSEPRVTHEIRSIWISYWSQADKSLGQKLATRLNVRPN 491          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 4.425e-81
Identity = 136/171 (79.53%), Postives = 151/171 (88.30%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF PA VVPG+YYSNDKL Q R+F+Y+DTQRHRLG NYLQLPVNAPKC  HNNHYDGFMNFMHRDEE+DYF SRYDPVRHAE  P P  IC GRREKC+I KE+NF QPG+RYRSWAPDRQERF+CR V+ALS+PR+THEIR IW+S+W+Q  KSLGQKLASRLNVRPNI
Sbjct:  322 LAFNPAHVVPGVYYSNDKLFQLRLFAYSDTQRHRLGTNYLQLPVNAPKCPYHNNHYDGFMNFMHRDEEVDYFQSRYDPVRHAEKVPIPNAICSGRREKCVIEKEDNFRQPGDRYRSWAPDRQERFLCRLVNALSEPRITHEIRSIWVSWWTQCDKSLGQKLASRLNVRPNI 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_PHAAU (Catalase OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.549e-81
Identity = 135/171 (78.95%), Postives = 152/171 (88.89%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAI+VPG+YYS+DK+LQTRIFSYAD+QRHRLGPNYL LP NAPK A HNNH++GFMNF+HRDEE++YFPSRYDPVRHAE  P PP +  GRREK  I KENNF Q GER+RSWAPDRQ+RFI RWVDALSDPRVTHEIR +WISYWSQA +SLGQK+AS LN+RPNI
Sbjct:  322 LAFCPAIIVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLLLPANAPKSAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAEKFPIPPAVFSGRREKIAIEKENNFKQAGERFRSWAPDRQDRFIRRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLNMRPNI 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_RICCO (Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 1.424e-79
Identity = 134/171 (78.36%), Postives = 149/171 (87.13%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCP IVVPG+ YS DKLLQTRIFSY+DTQRHRLGPNYLQLPVNAPKCA HNNH++GFMNFMHRDEE++YFPSR DP R+AE  P P  IC G+REKC+I KENNF QPGERYRSWAPDRQERF+ R V  LSDPR+THE+R IWISYW Q  KSLGQKLA+RLNV+P+I
Sbjct:  322 LAFCPGIVVPGVSYSEDKLLQTRIFSYSDTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRCDPARNAESFPVPSAICSGKREKCVIEKENNFKQPGERYRSWAPDRQERFLNRLVGGLSDPRITHELRTIWISYWIQCDKSLGQKLATRLNVKPSI 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 7.812e-78
Identity = 132/171 (77.19%), Postives = 149/171 (87.13%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAI+VPGI+YS+DKLLQTRIFSYADTQRHRLGPNYL LPVNAPKCA HNNH+DG MNFMHRDEE++YFPSR+D  RHAE  P PP +  G REKC+I KENNF Q GERYRS+ P RQ+RF+ RWVDALSDPR+THE+R IWISYWSQ   SLGQKLASRLN++PN+
Sbjct:  322 LAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 7.812e-78
Identity = 132/171 (77.19%), Postives = 149/171 (87.13%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCPAI+VPGI+YS+DKLLQTRIFSYADTQRHRLGPNYL LPVNAPKCA HNNH+DG MNFMHRDEE++YFPSR+D  RHAE  P PP +  G REKC+I KENNF Q GERYRS+ P RQ+RF+ RWVDALSDPR+THE+R IWISYWSQ   SLGQKLASRLN++PN+
Sbjct:  322 LAFCPAIIVPGIHYSDDKLLQTRIFSYADTQRHRLGPNYLMLPVNAPKCAYHNNHHDGSMNFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFKQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.020e-77
Identity = 131/171 (76.61%), Postives = 148/171 (86.55%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P ++VPGI +SNDK+LQTRIF+Y DTQRHRLGPNYL LPVNAPKCA HNNHYDGFMNFMHRDEE+DYFPS+YDP RHAE HP P  +  GRR++ +I KE+NF Q G+RYRSWAPDRQERF+ RWVDALSDPR+T EIR IW+SYWSQA KS GQKLASRLNVRP +
Sbjct:  322 LAFSPHMIVPGINFSNDKMLQTRIFAYGDTQRHRLGPNYLLLPVNAPKCAYHNNHYDGFMNFMHRDEEVDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_WHEAT (Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 2.968e-77
Identity = 129/171 (75.44%), Postives = 147/171 (85.96%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAFCP I+VPG+YYS+DKLLQTRIFSY+DTQRHRLGPNYL LP NAPKC+ HNNHYDG MNFMHRDEE+DYFPSR+DP +HA  +P P     GRREK +I KENNF QPGERYRS  P RQERFI RW+DALSDPR+THEI+ IW+SYWSQA KSLGQKLASRL+ +P++
Sbjct:  322 LAFCPGIIVPGVYYSDDKLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCSHHNNHYDGLMNFMHRDEEVDYFPSRFDPAKHAPRYPIPSRTLNGRREKMVIEKENNFKQPGERYRSMDPARQERFINRWIDALSDPRLTHEIKAIWLSYWSQADKSLGQKLASRLSSKPSM 492          
The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CATA3_NICPL5.585e-8481.87Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA_HELAN2.122e-8382.35Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA1_ARATH3.620e-8382.35Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV... [more]
CATA2_RICCO4.425e-8179.53Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]
CATA_PHAAU7.549e-8178.95Catalase OS=Phaseolus aureus PE=2 SV=1[more]
CATA1_RICCO1.424e-7978.36Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=... [more]
CATA2_ORYSJ7.812e-7877.19Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA2_ORYSI7.812e-7877.19Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA_AVIMR1.020e-7776.61Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA1_WHEAT2.968e-7775.44Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionEST0117 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ169 similar to catalase (acc# P17598), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bp
CTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTACTATTCAAATGA
TAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCACC
GTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGCT
CAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATGA
GGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGA
TGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATA
ATTCCAAAGGAAAACAACTTCAACCAACCTGGAGAGAGATACCGATCTTG
GGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTAT
CTGATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGG
TCTCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGT
GAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTT
AGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCG
TTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCT
GTAATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTG
back to top