CB250329

Overview
NameCB250329
Unique NameCB250329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_DANRE (Catalase OS=Danio rerio GN=cat PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 1 
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDE--EIDYFPSRY 228
            LAF P+ + PGI  S DK+LQ R+FSY DT RHRLG NYLQLPVN P   +  N+       MH ++    +Y+P+ +
Sbjct:  332 LAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVNCPYRTRVANYQRDGPMCMHDNQGGAPNYYPNSF 409
The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CATA_DANRE6.305e-1147.44Catalase OS=Danio rerio GN=cat PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionEST0117 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ169 similar to catalase (acc# P17598), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bp
CTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTACTATTCAAATGA
TAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCACC
GTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGCT
CAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATGA
GGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGA
TGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATA
ATTCCAAAGGAAAACAACTTCAACCAACCTGGAGAGAGATACCGATCTTG
GGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTAT
CTGATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGG
TCTCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGT
GAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTT
AGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCG
TTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCT
GTAATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTG
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