CB250329

Overview
NameCB250329
Unique NameCB250329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.525e-73
Identity = 123/171 (71.93%), Postives = 143/171 (83.63%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P  +VPG+YYS DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKCA HNNH DG MNFMHRDEE+DY PSR+DP RHAE +P P  +  GRRE C+I KENNF Q GERYRSW PDRQ+R++ +WV+ LSDPRVT+EIR IWISY SQA KS GQK+ASRL ++P +
Sbjct:  322 LAFNPGHIVPGLYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLNGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTYEIRSIWISYLSQADKSCGQKVASRLTLKPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.600e-73
Identity = 123/171 (71.93%), Postives = 143/171 (83.63%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P  +VPG+YYS DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKCA HNNH DG MNFMHRDEE+DY PSR+DP RHAE +P P  +  GRRE C+I KENNF Q GERYRSW PDRQ+R++ +WV+ LSDPRVT+EIR IWISY SQA KS GQK+ASRL ++P +
Sbjct:  322 LAFNPGHIVPGLYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLTGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTYEIRSIWISYLSQADKSCGQKVASRLTLKPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_IPOBA (Catalase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.686e-72
Identity = 122/171 (71.35%), Postives = 146/171 (85.38%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LA  PA +VPGIY+S+DK+LQ R+F+YADT RHRLGPNY+ LPVNAPKCA HNN YDG+MNF+HRDEE+DYFPS++D  R+AE  PTP  I  G+R+KC+I KENNF QPG+RYRSWAPDRQ+RFI RWV ALS+PRVTHEIR  WISY +QA +SLGQK+ASRLN+RP +
Sbjct:  322 LAMDPAHIVPGIYFSDDKMLQARVFAYADTHRHRLGPNYMLLPVNAPKCAHHNNSYDGYMNFVHRDEEVDYFPSKFDNTRNAERFPTPLRIVTGQRDKCVIEKENNFKQPGDRYRSWAPDRQDRFINRWVKALSEPRVTHEIRSTWISYLTQADRSLGQKVASRLNIRPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 6.405e-72
Identity = 123/171 (71.93%), Postives = 140/171 (81.87%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P  +VPGIYYS DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKC  HNNH DG MN  HRDEE+DY PSR+DP R AE +P P  +  GRR  C+IPKENNF Q GERYRSW PDRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  322 LAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71
Identity = 122/171 (71.35%), Postives = 139/171 (81.29%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P  +VPGIYYS DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKC  HNNH DG MN  HRDEE+DY PSR+DP R AE +P P  +  GRR  C+IPKENNF Q GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  322 LAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 9.249e-71
Identity = 122/171 (71.35%), Postives = 139/171 (81.29%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P  +VPGIYYS DKLLQTRIF+YADTQRHR+GPNY+QLPVNAPKC  HNNH DG MN  HRDEE+DYFPSR+DP R AE +P P  +  GRR  C+IPKENN  Q GERYRSW  DRQ+R+I +WV++LSDPRVTHEIR IWISY SQA KS GQK+ASRL V+P +
Sbjct:  322 LAFNPGHIVPGIYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCGHHNNHRDGAMNMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.958e-66
Identity = 114/171 (66.67%), Postives = 140/171 (81.87%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P +VVPGIYYS+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKCA HNNHYDG MNFMHRDEE+DY+PSR+ P+RHA   P  P    GRR+K  I K+N+F QPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  322 LAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.958e-66
Identity = 114/171 (66.67%), Postives = 140/171 (81.87%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P +VVPGIYYS+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKCA HNNHYDG MNFMHRDEE+DY+PSR+ P+RHA   P  P    GRR+K  I K+N+F QPGERYRSWAPDRQERFI R+   L+ P+V+ E+R IW++Y SQ  +SLG K+A+RLNV+P++
Sbjct:  322 LAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.916e-64
Identity = 114/173 (65.90%), Postives = 140/173 (80.92%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P +VVPGIYYS+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKC   NNHYDG MNFMHRDEE+DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+ R+ DAL+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  322 LAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKNNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.895e-61
Identity = 108/172 (62.79%), Postives = 134/172 (77.91%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRH-AEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P +VVPGIYYS+DK+LQ R+F+YADTQR+RLGPNYL LPVNAP+CA HNNHYDG MNFMHRDEE+DY+PSR+ P+R  A   P PP    GRREK  I K N+F QPGERYRSW  DRQ+RF+ R+ D+L  P+V+ E+R IWI   ++   SLG K+A+RLN++ N+
Sbjct:  325 LAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPRCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVSQELRSIWIDLLAKCDASLGMKIATRLNMKANM 496          
The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CATA2_NICPL1.525e-7371.93Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA1_TOBAC2.600e-7371.93Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA_IPOBA1.686e-7271.35Catalase OS=Ipomoea batatas PE=2 SV=1[more]
CATA1_SOLLC6.405e-7271.93Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA2_SOLTU3.179e-7171.35Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLTU9.249e-7171.35Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA1_ORYSJ8.958e-6666.67Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI8.958e-6666.67Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU4.916e-6465.90Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA3_MAIZE3.895e-6162.79Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionEST0117 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ169 similar to catalase (acc# P17598), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bp
CTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTACTATTCAAATGA
TAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCACC
GTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGCT
CAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATGA
GGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGA
TGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATA
ATTCCAAAGGAAAACAACTTCAACCAACCTGGAGAGAGATACCGATCTTG
GGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTAT
CTGATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGG
TCTCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGT
GAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTT
AGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCG
TTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCT
GTAATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTG
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