CB250329

Overview
NameCB250329
Unique NameCB250329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 9.594e-60
Identity = 110/173 (63.58%), Postives = 135/173 (78.03%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAE--MHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 513
            LAF P +VVPGIYYS+DK+LQ R+F+YADTQR+RLGPNYL LPVNAPKC    NHYDG MNFMHRDEE+DY+PSR+ P+RHAE    P P     G+REK  I KEN+F QPGERYRSWAPDRQ+RF+      L+ P+V+HE+R IWI + S+  KS G K+A+RLNV+P++
Sbjct:  321 LAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPNYLMLPVNAPKCGFKKNHYDGAMNFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVA-LRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD--PVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHI 435
            + F P ++VPG+  S D++LQ R+FSY+DTQRHR+GPNYLQLP+N+PK    NN  DG M F  +   I+Y P+ YD  P  +        EI G    + +  K NNF    E ++ ++   +   +   VD     R   +IR++
Sbjct:  312 VGFNPGVLVPGMLPSEDRVLQGRLFSYSDTQRHRVGPNYLQLPINSPKTPVDNNQRDGQMPFKQQTSSINYEPNSYDTEPKENPAYIEPEQEIRGDISGRLVAEKPNNFGHAKEVWKRYSDAERAALVKNIVDDWEGVREDIKIRNL 458          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATB_PSESY (Catalase OS=Pseudomonas syringae pv. syringae GN=katB PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21
Identity = 63/164 (38.41%), Postives = 96/164 (58.54%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEI-CGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTH-EIRHIWISYWSQACKSLGQKLA 486
            +A  PA +VPGI  S D+LLQ R+FSYADTQ +RLG   L LPVN PK A +N + DG +N  H    ++Y PSR +P R A+      E+   G  ++  I +E NF Q G+ +RS++   +   + R+ ++L+D   TH E ++I +S   +  +  G ++A
Sbjct:  332 VAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGAIGLSLPVNQPKVAVNNGNQDGALNTGHTTSGVNYEPSRLEP-RPADDKARYSELPLSGTTQQAKITREQNFKQAGDLFRSYSAKEKTDLVQRFGESLAD---THTESKNIMLSVLYKEDRHYGTRVA 491          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21
Identity = 57/147 (38.78%), Postives = 80/147 (54.42%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD--PVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHI 435
            + F P ++V G+  S D+LLQ R+FSY+DTQRHR+GPNYLQLP+N+PK    NN  DG M F  +   I+Y P+ YD  P  +        EI G    + I  K NNF    E +  ++   +   +   VD  S  R   +IR++
Sbjct:  312 VGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPKENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRYSNAERAALVKNIVDDWSQVREDIKIRNL 458          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21
Identity = 56/147 (38.10%), Postives = 81/147 (55.10%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRY--DPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHI 435
            + F P ++V G+  S D+LLQ R+FSY+DTQRHR+GPNYLQLP+N+PK    NN  DG+M F  +   I+Y P+ Y  +P  +        EI G    + I  K NNF    E +  ++   +   +   VD  S  R   +IR++
Sbjct:  312 VGFNPGVLVRGMLPSEDRLLQGRLFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGYMPFKQQTSSINYEPNSYETEPKENPAFIEQEQEIRGDISGRLIAEKPNNFGHAKEVWDRYSDAERAALVKNIVDDWSGVRDDIKIRNL 458          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATB_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19
Identity = 59/162 (36.42%), Postives = 84/162 (51.85%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLA 486
            +A  P+ +VPGI  S D+LLQ R+F+YADTQ +R+G N L LPVN P+   +  + DG +N  H    ++Y PSR DP               G  ++  I +E NF Q GE +RS+    Q   I     AL+      E ++I +SY+ +A    G  LA
Sbjct:  335 VAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHSTSGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRSYGKKDQADLIASLGGALA--ITDDESKYIMLSYFYKADSDYGTGLA 494          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFM-----NFMHRDEEIDYFPSRYDPVRHAEMH-PTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVR 504
            AF   ++V G+ +S+DK+LQ R FSY+DTQR+R+GPNYLQLP+NAPK     N  DG M      F  +D+ ++Y PS     + A    P       G   +  I + N F Q G +YR++A   ++  +     AL+   V   I+   + Y++ A    GQ++   +  +
Sbjct:  344 AFGTGVLVDGLDFSDDKMLQGRTFSYSDTQRYRVGPNYLQLPINAPKKHVATNQRDGQMAYRVDTFEGQDQRVNYEPSLLSGPKEAPRRAPEHTPRVEGNLVRAAIERPNPFGQAGMQYRNFADWERDELVSNLSGALAG--VDKRIQDKMLEYFTAADADYGQRVREGIQAK 514          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_DICDI (Catalase-A OS=Dictyostelium discoideum GN=catA PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17
Identity = 63/174 (36.21%), Postives = 90/174 (51.72%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP---KCAQHNNHYDGFMNFM-HRDEEIDYFPSRY-DPVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P+ +VPGI  S DK+LQ R+FSY DT RHRLG NY Q+PVN P   K    N   DGFM    +  +  +Y P+ +  P  H E      ++ G    +      ++F QPG+ YR  + D + RF+   V  +S   +  EI+   +S + +A K LG +L   L +  N
Sbjct:  313 AFSPSHMVPGIEPSPDKMLQGRLFSYPDTHRHRLGVNYQQIPVNCPFAVKGGVKNYQRDGFMAVNGNGGKGPNYQPNSFGGPEPHPEFAQHKFDVSGFAARQPYNHPNDDFVQPGDLYRLMSEDAKSRFVSNLVGHMSGVTI-KEIQVRAVSNFYKADKDLGARLCKGLGIDVN 485          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDGFMNFMHRDEEIDYFPS--RYDPVRHAEMHPTPPEICGGRREKCIIPKENNFNQP 330
            AFCPA +VPGI +S DK+LQ RIFSY DT  HRLGPNY+QLPVN P +   HN   DG M + ++    ++FP+   Y   R      T P    G  ++     +NN++QP
Sbjct:  329 AFCPAHIVPGIEFSPDKMLQGRIFSYTDTHFHRLGPNYIQLPVNCPYRSRAHNTQRDGAMAYDNQQHAPNFFPNSFNYGKTRPDVKDTTFP--ATGDVDRYESGDDNNYDQP 438          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDGFMNFMHRDEEIDYFPSRY------DPVRHAEMHPTPPEICGGRREKCIIPKENNFNQP 330
            AFCPA +VPGI +S DK+LQ RIFSY DT  HRLGPNY+QLPVN P +   H    DG M +  + +  +YFP+ +      D V+ +    T      G  ++     ++N+ QP
Sbjct:  329 AFCPAHIVPGIEFSPDKMLQGRIFSYTDTHYHRLGPNYIQLPVNCPYRSRAHTTQRDGAMAYESQGDAPNYFPNSFRGYRTRDDVKESTFQTT------GDVDRYETGDDHNYEQP 438          
The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CATA_SECCE9.594e-6063.58Catalase OS=Secale cereale PE=2 SV=1[more]
CATA_LISSE3.017e-2137.41Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATB_PSESY5.146e-2138.41Catalase OS=Pseudomonas syringae pv. syringae GN=k... [more]
CATA_LISMO5.146e-2138.78Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATA_LISIN6.721e-2138.10Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATB_PSEAE2.824e-1936.42Catalase OS=Pseudomonas aeruginosa GN=katB PE=3 SV... [more]
CATA_DEIRA8.216e-1933.53Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATA_DICDI1.549e-1736.21Catalase-A OS=Dictyostelium discoideum GN=catA PE=... [more]
CATA1_CAEEL2.024e-1744.64Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA2_CAEEL5.888e-1741.38Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionEST0117 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ169 similar to catalase (acc# P17598), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bp
CTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTACTATTCAAATGA
TAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCACC
GTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGCT
CAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATGA
GGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGA
TGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATA
ATTCCAAAGGAAAACAACTTCAACCAACCTGGAGAGAGATACCGATCTTG
GGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTAT
CTGATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGG
TCTCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGT
GAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTT
AGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCG
TTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCT
GTAATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTG
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