CB250329

Overview
NameCB250329
Unique NameCB250329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14
Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHY-DGFMNF-MHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKEN-NFNQPGERYRSWAPD-RQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 501
            AF PA +VPGI  S DK+LQ R+FSY DT  HRLGPNY  +PVNAPK +  N++  DGFM    +     +Y+P+ +       ++  PP    G   + +    N +F Q G  YR    D  +E  +   V  LS  +   ++R   + +  +A +  G ++A  L +
Sbjct:  316 AFSPANLVPGIGISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFMRVDANGGSGPNYWPNSFGGPSPDSVYLEPPFGVSGLAARTLYTHPNDDFVQAGNLYRDVMTDYDRENLVGNIVSHLSAAQKRIQLRQTALFF--KADRDYGSRVAKGLEL 483          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAW (Catalase OS=Staphylococcus aureus (strain MW2) GN=katA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAM (Catalase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=katA PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CATA_METBF1.228e-1434.12Catalase OS=Methanosarcina barkeri (strain Fusaro ... [more]
CATA_STAAW1.603e-1430.94Catalase OS=Staphylococcus aureus (strain MW2) GN=... [more]
CATA_STAAS1.603e-1430.94Catalase OS=Staphylococcus aureus (strain MSSA476)... [more]
CATA_STAAR1.603e-1430.94Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATA_STAAN1.603e-1430.94Catalase OS=Staphylococcus aureus (strain N315) GN... [more]
CATA_STAAM1.603e-1430.94Catalase OS=Staphylococcus aureus (strain Mu50 / A... [more]
CATA_STAAC1.603e-1430.94Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]
CATA_STAAB1.603e-1430.94Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA81.603e-1430.94Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA31.603e-1430.94Catalase OS=Staphylococcus aureus (strain USA300) ... [more]

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Properties
Property NameValue
Genbank descriptionEST0117 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ169 similar to catalase (acc# P17598), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bp
CTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTACTATTCAAATGA
TAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCACC
GTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGCT
CAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATGA
GGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGA
TGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATA
ATTCCAAAGGAAAACAACTTCAACCAACCTGGAGAGAGATACCGATCTTG
GGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTAT
CTGATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGG
TCTCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGT
GAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTT
AGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCG
TTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCT
GTAATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTG
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