CB250338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H3L5_ARATH (Putative histone H3-like 5 OS=Arabidopsis thaliana GN=At5g65350 PE=5 SV=3) HSP 1 Score: 232.646 bits (592), Expect = 5.859e-61 Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 AR STGGKAPRKQLA KAAR+SAP TGGVKKPHR+RPGTVALR+IRKYQKSTE+LIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHA+RVTIMPK+IQLARRIRGERA Sbjct: 8 ARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTEILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKEIQLARRIRGERA 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H33B_LILLO (Histone H3.3b OS=Lilium longiflorum GN=soH3-1 PE=2 SV=3) HSP 1 Score: 232.646 bits (592), Expect = 5.859e-61 Identity = 119/130 (91.54%), Postives = 125/130 (96.15%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPT-TGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARKS PT GG+K+P RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD+KTDLRFQSHAVLALQE AEAYLVG+FEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKSIPTGMGGMKRPRRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEGAEAYLVGIFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 137
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H31_LODEL (Histone H3.1/H3.2 OS=Lodderomyces elongisporus GN=HHT1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 2.227e-60 Identity = 116/129 (89.92%), Postives = 124/129 (96.12%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLASKAARKSAP+TGGVKKPHRY+PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA EAYLVGLFEDTNLCAIHA+RVTI KDIQLARR+RGER+ Sbjct: 8 ARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H31_SCHPO (Histone H3.1/H3.2 OS=Schizosaccharomyces pombe GN=hht1 PE=1 SV=2) HSP 1 Score: 229.95 bits (585), Expect = 3.798e-60 Identity = 115/129 (89.15%), Postives = 122/129 (94.57%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLASKAARK+AP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA EAYLV LFEDTNLCAIH +RVTI PKD+QLARR+RGER+ Sbjct: 8 ARKSTGGKAPRKQLASKAARKAAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVSLFEDTNLCAIHGKRVTIQPKDMQLARRLRGERS 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H31_CANAL (Histone H3.1/H3.2 OS=Candida albicans GN=HHT1 PE=3 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 4.960e-60 Identity = 115/129 (89.15%), Postives = 124/129 (96.12%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLASKAARKSAP+TGGVKKPHRY+PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA EAYLVGLFEDTNLCAIHA+RVTI KD+QLARR+RGER+ Sbjct: 8 ARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDMQLARRLRGERS 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H32_USTMA (Histone H3.2 OS=Ustilago maydis GN=HHT2 PE=3 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 1.443e-59 Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGER 386 ARKSTGGKAPRKQLA+KAARKSAP+ GGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQE+AEAYLV LFEDTNL AIHA+RVTI PKDI LARR+RGER Sbjct: 8 ARKSTGGKAPRKQLATKAARKSAPSAGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQESAEAYLVSLFEDTNLAAIHAKRVTIQPKDIALARRLRGER 135
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2) HSP 1 Score: 228.024 bits (580), Expect = 1.443e-59 Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGER 386 ARKSTG KAPRKQLASKAARKSAP TGG+KKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRFQS AVLALQEAAEAYLVGLFEDTNLCAIHARRVTIM KD+QLARRIRGER Sbjct: 8 ARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 228.024 bits (580), Expect = 1.443e-59 Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGER 386 ARKSTG KAPRKQLASKAARKSAP TGG+KKPHR+RPGTVALREIRKYQKST+LLIRKLPFQRLVR+IA +FK +LRFQS AVLALQEAAEAYLVGLFEDTNLCAIHARRVTIM KD+QLARRIRGER Sbjct: 8 ARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H3_MORAP (Histone H3 OS=Mortierella alpina GN=H3.1 PE=3 SV=3) HSP 1 Score: 227.254 bits (578), Expect = 2.462e-59 Identity = 115/128 (89.84%), Postives = 121/128 (94.53%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGER 386 ARKSTGGKAPRKQLA+KAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLV LFEDTNL AIHA+RVTI PKDI LARR+RGER Sbjct: 8 ARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQEASEAYLVSLFEDTNLAAIHAKRVTIQPKDIHLARRLRGER 135
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H33_LODEL (Histone H3.3 OS=Lodderomyces elongisporus GN=HHT3 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 2.462e-59 Identity = 114/129 (88.37%), Postives = 123/129 (95.35%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLASKAARKSAP +GGVKKPHRY+PGTVALREIR++QKSTELLIRKLPFQRLVREIAQDFK+DLRFQS A+ ALQEA EAYLVGLFEDTNLCAIHA+RVTI KDIQLARR+RGER+ Sbjct: 8 ARKSTGGKAPRKQLASKAARKSAPVSGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAIGALQEAVEAYLVGLFEDTNLCAIHAKRVTIQKKDIQLARRLRGERS 136 The following BLAST results are available for this feature:
BLAST of CB250338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250338 ID=CB250338; Name=CB250338; organism=Citrus sinensis; type=EST; length=457bpback to top |