CB250342

Overview
NameCB250342
Unique NameCB250342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB250342_ssr22 microsatellite CB250342_ssr22:22..31. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig118 contig Csv1_Contig118:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28
Identity = 75/186 (40.32%), Postives = 114/186 (61.29%), Query Frame = 1
Query:   40 LPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 591
            LPW +R+ +A + A+ +A+LHS     IY RDIK+SNILLD +Y +K++DFGL+R G M + S++ST   GT GY  P+Y    HL+ +SDVYSFGV+L+EI++  + +D +RP  E NL   A   +  +  V  I+D  L+     +       +A +A +CL+F    RPTM +V   L+ ++
Sbjct:  172 LPWFLRVNVALDAAKGLAFLHSDPVKVIY-RDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQ---YLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQLQ 353          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28
Identity = 76/201 (37.81%), Postives = 109/201 (54.23%), Query Frame = 1
Query:   25 ERGSGLPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASNIYMGS 627
            +RG  L W  R+ I    A+ +AYLH   +P I HRDIKSSNILLD N  ++V+DFGL++L   E SHI+T   GT GYL P+Y Q    ++K+DVYSFGV+++E+++     D S      N+       I      EI+D   E         S+  +  +A +C++   D RPTM  V + LE   ++   S+ Y  S
Sbjct:  391 KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSCE----GVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESEVMTPCPSDFYDSS 587          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 1
Query:   40 LPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEEL 579
            L W  RL IA   AQ +AYLH    P I HRDIKSSNILLD N+ ++++DFG+++      ++ ST   GT GY+DP+Y +   L++KSD+YSFG+VL+E++T  K VD     +E NL  + + +     V E +D   E          I    +LA  C   +   RPTM EV+  L
Sbjct:  745 LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVD-----NEANLHQMILSKADDNTVMEAVD--AEVSVTCMDSGHIKKTFQLALLCTKRNPLERPTMQEVSRVL 917          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 79/199 (39.70%), Postives = 112/199 (56.28%), Query Frame = 1
Query:    1 ALCQHLQRERGSGLPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAA-LAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIR 591
            +L  HL R R    PW +R+ I    A+ +A+LHS     IY RD K+SNILLD NY +K++DFGL++LG   E SH++T   GT GY  P+Y    HL  KSDV++FGVVL+EI+T L   +  RP  + +L   L  +   +  V +I+D  +   +  +T      +A +   C+      RP M EV E LEHI+
Sbjct:  176 SLESHLFR-RNDPFPWDLRIKIVIGAARGLAFLHSLQREVIY-RDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGI---KGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQ 369          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27
Identity = 71/199 (35.68%), Postives = 112/199 (56.28%), Query Frame = 1
Query:   10 QHLQRERG-SGLPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVD--FSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 597
            Q   +ER  + + W +   IA + A+A++YLH   +P + HRDIK SNILLD NY + ++DFGLS+L  T  SH++T   GT GY+ P+Y     +S+K+DVYS+G+VL+E+I+  + +D  FS   +  N+ + A   + +G   E+    L    +      +  V  LA +C      +RPTM +    L+ I+ S
Sbjct:  343 QDFIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGL---WETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLKRIQPS 538          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27
Identity = 71/197 (36.04%), Postives = 114/197 (57.87%), Query Frame = 1
Query:   13 HLQRERGSGLPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAP-QGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSS 600
            H  ++ G  L W+ R  IA  +A+ +A+LH   +P I HRD+KSSN+LLD N  ++V+DFG++RL     +H+S +   GTPGY+ P+Y+Q F  S K DVYS+GVVL+E++T  +  D S    + NL    + +  +  + ++ DP L     A  +  + ++ ++A  CL      RPTM++V    + I+  S
Sbjct:  969 HDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SPDFGDNNLVGW-VKQHAKLRISDVFDPELMKEDPALEIELLQHL-KVAVACLDDRAWRRPTMVQVMAMFKEIQAGS 1162          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27
Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 1
Query:   40 LPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSR 375
            + W +RL IA E A A++Y+HSA + PIYHRDIK++NILLD  YR+KV+DFG SR      +H++T   GT GY+DP+Y      +DKSDVYSFGVVL+E+IT  K +   R
Sbjct:  528 MTWEVRLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRKR 639          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27
Identity = 71/200 (35.50%), Postives = 110/200 (55.00%), Query Frame = 1
Query:   13 HLQRERGSGLPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRIGRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 612
            H   E  + L W  RL I    +  +AY+H    P I HRDIKSSNILLD N+++ VADFGLSRL +   +H++T   GT GY+ P+Y Q +  + + DVYSFGVV++E++T  + ++  RP     L A        G  +E+ D  L   R++    ++  V ++A  C+  +   RP + +V + L++I      +N
Sbjct:  889 HENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFDTLL---RESGNEEAMLRVLDIACMCVNQNPMKRPNIQQVVDWLKNIEAEKNQNN 1085          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 76/188 (40.43%), Postives = 111/188 (59.04%), Query Frame = 1
Query:   40 LPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVS 597
            L W +R+ +A + A+ +A+LHS     IY RDIK+SNILLD ++ +K++DFGL+R G M E S++ST   GT GY  P+Y    HL+ +SDVYSFGVVL+E++   + +D +RP  E NL   A   +  R  V  I+D  L      +       +A +A +CL+F    RPTM +V   L  ++ S
Sbjct:  167 LSWILRIKVALDAAKGLAFLHSDPVKVIY-RDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRL---NSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQDS 350          
BLAST of CB250342 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27
Identity = 67/193 (34.72%), Postives = 107/193 (55.44%), Query Frame = 1
Query:   40 LPWTIRLTIATETAQAIAYLHSAMNPPIYHRDIKSSNILLDYNYRSKVADFGLSRLGMT-ESSHISTAPQGTPGYLDPQYHQYFHLSDKSDVYSFGVVLIEIITALKVVDFSRPHSEVNLAALAIDRI-GRGCVDEIIDPYLEPHRDAWTLSSIHNVAELAFRCLAFHRDMRPTMMEVAEELEHIRVSSWASN 612
            L W  R+ IA   A+ + YLH  M PP+ +RD+K SNILL  +Y+ K++DFGL+++G + + +H+ST   GT GY  P Y     L+ KSD+YSFGVVL+E+IT  K +D ++   + NL   A      R    +++DP L+     + +  ++    ++  C+     MRP + +V   L  +  S +  N
Sbjct:  199 LDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQ---GQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYDPN 388          
The following BLAST results are available for this feature:
BLAST of CB250342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 304
Match NameE-valueIdentityDescription
BIK1_ARATH2.034e-2840.32Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
FEI2_ARATH2.657e-2837.81LRR receptor-like serine/threonine-protein kinase ... [more]
ERL2_ARATH4.532e-2840.00LRR receptor-like serine/threonine-protein kinase ... [more]
CX32_ARATH5.919e-2839.70Probable serine/threonine-protein kinase Cx32, chl... [more]
RPK1_ARATH1.319e-2735.68Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_ARATH1.319e-2736.04Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
WAKLF_ARATH2.249e-2753.57Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
PSYR1_ARATH2.249e-2735.50Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y3545_ARATH2.938e-2740.43Probable receptor-like protein kinase At3g55450 OS... [more]
RLCK7_ARATH2.938e-2734.72Probable serine/threonine-protein kinase RLCKVII O... [more]

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Properties
Property NameValue
Genbank descriptionEST0132 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ196 similar to putative protein kinase (acc# AAL91622), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250342 ID=CB250342; Name=CB250342; organism=Citrus sinensis; type=EST; length=705bp
GCTCTGTGTCAGCATCTGCAAAGAGAGAGAGGAAGTGGACTTCCTTGGAC
AATACGGCTTACCATAGCCACTGAGACTGCTCAAGCAATTGCCTATCTTC
ACTCAGCTATGAATCCACCAATTTACCACCGAGACATCAAATCCAGCAAT
ATACTATTGGATTACAACTATAGGTCAAAGGTAGCGGATTTTGGGCTTTC
CAGACTTGGCATGACTGAGTCATCCCACATCTCAACTGCTCCACAAGGAA
CTCCAGGCTACCTTGATCCTCAATACCATCAGTATTTCCATCTTTCTGAC
AAAAGTGATGTTTACAGTTTTGGGGTAGTTCTTATTGAGATCATAACTGC
ACTGAAAGTGGTTGATTTTTCTCGCCCTCACAGTGAGGTGAATTTGGCTG
CACTTGCTATTGATAGGATTGGAAGAGGTTGTGTGGATGAGATAATAGAT
CCATACCTTGAGCCACATAGGGATGCGTGGACACTCTCATCCATTCACAA
TGTTGCTGAGCTAGCATTTAGATGCCTTGCGTTTCATAGGGACATGAGGC
CTACTATGATGGAAGTGGCAGAAGAGCTAGAACACATCAGGGTCAGTTCA
TGGGCTTCAAATATTTATATGGGCTCACCCGCAGTGTCTTGTTGTTCATT
ATCGGAATGCGGAAGTGAGAGATCACTGAGTGGCTTGACAGTTAAGAAGG
CAGGG
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