CB250343
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_BURCH (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain HI2424) GN=wrbA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.848e-27 Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHTAGIAKKL 418 P+ T +ELA+ D +FG PTRFG MA Q + FLD TGGLW L GK +F + T L+HHGM+ V + Y +G+ M ++ GG+PYGA T AG DGSRQP+ EL+ A +QGKH A +A KL Sbjct: 60 PVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASKL 198
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_BURCC (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain MC0-3) GN=wrbA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.848e-27 Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHTAGIAKKL 418 P+ T +ELA+ D +FG PTRFG MA Q + FLD TGGLW L GK +F + T L+HHGM+ V + Y +G+ M ++ GG+PYGA T AG DGSRQP+ EL+ A +QGKH A +A KL Sbjct: 60 PVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASKL 198
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_BURCA (Flavoprotein wrbA OS=Burkholderia cenocepacia (strain AU 1054) GN=wrbA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.848e-27 Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHTAGIAKKL 418 P+ T +ELA+ D +FG PTRFG MA Q + FLD TGGLW L GK +F + T L+HHGM+ V + Y +G+ M ++ GG+PYGA T AG DGSRQP+ EL+ A +QGKH A +A KL Sbjct: 60 PVATVDELADYDAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELASKL 198
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_AZOSB (Flavoprotein wrbA OS=Azoarcus sp. (strain BH72) GN=wrbA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 2.848e-27 Identity = 66/142 (46.48%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHTAGIAKKLKG 424 P+ T EL + D +FG PTRFG MA+Q + FLD TGGLW + +L GK +F + T L+HHGM+ V + YT A M+++ GGSPYGA T A GDG+RQP+E EL A QG H A IA KL G Sbjct: 59 PVATVGELPDYDAIIFGTPTRFGNMASQMRNFLDQTGGLWMSGKLVGKVGSVFASTATQHGGQETTITSFHTTLLHHGMVIVGLPYT-EARQMNMDEITGGSPYGATTLAKGDGTRQPSENELAMARFQGGHVAKIAAKLAG 199
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA1_RHIME (Flavoprotein wrbA 1 OS=Rhizobium meliloti GN=wrbA1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.719e-27 Identity = 65/140 (46.43%), Postives = 82/140 (58.57%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTF-AGDGSRQPTELELEQAFHQGKHTAGIAKKL 418 P+ T ELA+ D +FG TR+GT+A+Q + F+D TGGLW +L GK F L I ++HHGM+ V + Y F G +E+VKGGSPYGA T GDGSRQP+ +ELE A QG H A IA KL Sbjct: 59 PVATVEELADYDAIIFGAGTRYGTVASQLRNFIDQTGGLWAKGKLVGKVGSAFTSSATQHGGQESTILGLIPTMMHHGMVVVGLPYAF-QGQMGVEEVKGGSPYGASTITGGDGSRQPSAVELEAARFQGAHVARIAAKL 197
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_RHORT (Flavoprotein wrbA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=wrbA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 6.344e-27 Identity = 66/142 (46.48%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHTAGIAKKLKG 424 PI + +ELA+ DG + G PTRFG MA Q + FLD TGGLW +L GK G F L+ T +HHGM+ V + Y MF+ + + G PYGA T A GDGSRQP++ E A QG+H AG+AKKLKG Sbjct: 63 PIASVDELADYDGILIGTPTRFGNMAGQMRNFLDQTGGLWAKGKLVGKAGGAF-TSTATGGGAETTLLSVYTNFLHHGMVVVGVPYG-TPEMFDTSEARAGGPYGAATLAGGDGSRQPSDKERTIARFQGRHFAGVAKKLKG 202
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_ACICJ (Flavoprotein wrbA OS=Acidiphilium cryptum (strain JF-5) GN=wrbA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 6.344e-27 Identity = 67/142 (47.18%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHTAGIAKKLKG 424 P+ TP ELA+ D +FG PTRFG M Q + FLD TGGLW L GK +F + T L HHGMI V + Y+ + M ++ GG+PYGA T AG DGSRQP+ EL A QGKH AGIA KL G Sbjct: 59 PVATPAELADYDAIIFGTPTRFGNMCGQMRNFLDQTGGLWAKGALIGKVGSVFASTGTQHGGQETTITSFHTTLFHHGMIVVGVPYS-NPELTNMNEITGGTPYGATTLAGADGSRQPSANELAIARAQGKHVAGIAAKLAG 199
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_BURM1 (Flavoprotein wrbA OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=wrbA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.286e-27 Identity = 64/140 (45.71%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHTAGIAKKL 418 P+ T +ELA+ D +FG PTRFG MA Q + FLD TGGLW L GK +F + T L+HHGM+ V + Y +G+ M ++ GG+PYGA T AG DGSRQP+ EL+ A +QGKH A +A KL Sbjct: 60 PVATVDELADYDAILFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHHGMVIVGVPYAC-SGLVNMNEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: P25_SCHPO (P25 protein OS=Schizosaccharomyces pombe GN=obr1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 8.286e-27 Identity = 65/133 (48.87%), Postives = 85/133 (63.91%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGY--TFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGK 391 P++T + L + D F+FG+PTR+GT AQF+ F D+TGGLW L GK G F+ ALTA+T VHHGMIFVP+GY TF M +E + GGS +GAG++AG DGSR ++ ELE A QG+ Sbjct: 62 PVVTLDVLTQYDAFLFGYPTRYGTPPAQFRTFWDSTGGLWVQGALHGKYFGQFFSTGTLGGGQESTALTAMTSFVHHGMIFVPLGYKNTFSL-MANVESIHGGSSWGAGSYAGADGSRNVSDDELEIARIQGE 193
BLAST of CB250343 vs. ExPASy Swiss-Prot
Match: WRBA_RHOCS (Flavoprotein wrbA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=wrbA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.411e-26 Identity = 65/142 (45.77%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 2 PIITPNELAEADGFVFGFPTRFGTMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHTAGIAKKLKG 424 P+ T ELAE D + G PTRFG M +Q FLD TGGLW L GK F + +T L+HHGM+ V + Y++ G+ +E+VKGG+PYGA T A GDGSR+PTE+EL A +QG A A KL+G Sbjct: 60 PVATVAELAEYDAIIVGSPTRFGRMTSQMANFLDQTGGLWAKGALNGKVGAAFTSTASQHGGQETTLFSILTNLLHHGMVVVGLPYSY-EGLSGVEQVKGGTPYGASTIADGDGSRRPTEVELGGARYQGALVARTAAKLRG 200 The following BLAST results are available for this feature:
BLAST of CB250343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250343 ID=CB250343; Name=CB250343; organism=Citrus sinensis; type=EST; length=481bpback to top |