CB250347

Overview
NameCB250347
Unique NameCB250347
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10666 contig Csv1_Contig10666:131..480. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_RAT (Casein kinase I isoform gamma-1 OS=Rattus norvegicus GN=Csnk1g1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.189e-17
Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ +S +E +HSK  ++ DVKPENFL+G  G   E  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  105 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 219          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_MOUSE (Casein kinase I isoform gamma-1 OS=Mus musculus GN=Csnk1g1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.189e-17
Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ +S +E +HSK  ++ DVKPENFL+G  G   E  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  105 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREHKSL-TGTARYMS 219          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_MACFA (Casein kinase I isoform gamma-1 OS=Macaca fascicularis GN=CSNK1G1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.189e-17
Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ +S +E +HSK  ++ DVKPENFL+G  G   E  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  105 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 219          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_HUMAN (Casein kinase I isoform gamma-1 OS=Homo sapiens GN=CSNK1G1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.189e-17
Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ +S +E +HSK  ++ DVKPENFL+G  G   E  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  105 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 219          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_BOVIN (Casein kinase I isoform gamma-1 OS=Bos taurus GN=CSNK1G1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.189e-17
Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ +S +E +HSK  ++ DVKPENFL+G  G   E  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  104 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 218          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_XENLA (Casein kinase I isoform gamma-1 OS=Xenopus laevis GN=csnk1g1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.164e-17
Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 2
Query:   11 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ IS +E +HSK  ++ DVKPENFL+G  G   E  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  108 GPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHIIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 219          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1G1_CHICK (Casein kinase I isoform gamma-1 OS=Gallus gallus GN=CSNK1G1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.164e-17
Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G  G Y  MV+++LGPSL D+++    T +++ V  IAI+ IS +E +HSK  ++ DVKPENFL+G  G   +  +  +D GLA ++ D  T  H+ Y +   +  GT RY S
Sbjct:  104 YYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSL-TGTARYMS 218          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1_EIMTE (Casein kinase I OS=Eimeria tenella PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.439e-17
Identity = 45/119 (37.82%), Postives = 78/119 (65.55%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKL---FPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G +GDY VM++++LGPSL D+++  +  +S++ V  +A + ++ +E +HS+ ++H D+KP+NFL+G       KK+   F +D GLA K+RD  T  H+ Y +  ++  GT RYAS
Sbjct:   69 YWYGIEGDYNVMIIELLGPSLEDLFSICNRKLSLKTVLMLADQMLNRIEFVHSRHFIHRDIKPDNFLIG-----RGKKMSIVFAIDFGLAKKYRDPRTQSHIPYREGKNL-TGTARYAS 181          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: CKI2_SCHPO (Casein kinase I homolog 2 OS=Schizosaccharomyces pombe GN=cki2 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.439e-17
Identity = 41/116 (35.34%), Postives = 72/116 (62.07%), Query Frame = 2
Query:    2 HFKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            ++ G++G + ++V+D+LGPSL D++       S++ VA  A + +S ++ +H K  V+ D+KP+NFL+G P + +   ++ VD G+A  +RD  T  H+ Y +R  +  GT RY S
Sbjct:   72 YYFGQEGLHNILVIDLLGPSLEDLFEWCGRRFSVKTVAMTAKQMLSRVQTIHEKNLVYRDIKPDNFLIGRPSSRNANMVYMVDFGMAKYYRDPKTKQHIPYSERKSL-SGTARYMS 186          
BLAST of CB250347 vs. ExPASy Swiss-Prot
Match: KC1_DICDI (Casein kinase I OS=Dictyostelium discoideum GN=cak1-1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.067e-16
Identity = 44/113 (38.94%), Postives = 67/113 (59.29%), Query Frame = 2
Query:   11 GRQGDYYVMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGPPGTPDEKKLFPVDLGLATKWRDSTTGMHVEYDQRPDVFRGTVRYAS 349
            G  GDY +MVMD+LGPSL D++N      S++ V  +  + +  +E +HS  ++H D+KP+NFL+G         L  +D GLA ++RD  T  H+ Y +  ++  GT RYAS
Sbjct:   72 GFDGDYNIMVMDLLGPSLEDLFNYCGRKFSLKTVLMLGDQMLRRIEFIHSNNFIHRDIKPDNFLMGIGKRGHVVNL--IDFGLAKRYRDPKTHQHIPYREHKNL-TGTARYAS 181          
The following BLAST results are available for this feature:
BLAST of CB250347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
KC1G1_RAT3.189e-1738.79Casein kinase I isoform gamma-1 OS=Rattus norvegic... [more]
KC1G1_MOUSE3.189e-1738.79Casein kinase I isoform gamma-1 OS=Mus musculus GN... [more]
KC1G1_MACFA3.189e-1738.79Casein kinase I isoform gamma-1 OS=Macaca fascicul... [more]
KC1G1_HUMAN3.189e-1738.79Casein kinase I isoform gamma-1 OS=Homo sapiens GN... [more]
KC1G1_BOVIN3.189e-1738.79Casein kinase I isoform gamma-1 OS=Bos taurus GN=C... [more]
KC1G1_XENLA4.164e-1740.71Casein kinase I isoform gamma-1 OS=Xenopus laevis ... [more]
KC1G1_CHICK4.164e-1738.79Casein kinase I isoform gamma-1 OS=Gallus gallus G... [more]
KC1_EIMTE5.439e-1737.82Casein kinase I OS=Eimeria tenella PE=2 SV=1[more]
CKI2_SCHPO5.439e-1735.34Casein kinase I homolog 2 OS=Schizosaccharomyces p... [more]
KC1_DICDI2.067e-1638.94Casein kinase I OS=Dictyostelium discoideum GN=cak... [more]

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Properties
Property NameValue
Genbank descriptionEST0137 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ202 similar to casein kinase (acc# NP_180147), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250347 ID=CB250347; Name=CB250347; organism=Citrus sinensis; type=EST; length=350bp
ACACTTCAAGGGCCGGCAAGGTGACTATTATGTGATGGTAATGGATATGC
TGGGACCAAGCTTGTGGGATGTATGGAATAATAACTCGCATACAATGTCC
ATTGAAATGGTTGCCTGCATTGCCATTGAAGCAATATCGATATTGGAGAA
GATGCACTCCAAAGGGTATGTGCATGGAGATGTGAAGCCTGAAAATTTTC
TGCTTGGTCCTCCTGGAACACCTGATGAGAAGAAATTATTCCCTGTTGAC
CTTGGACTAGCTACTAAATGGCGAGACAGCACAACTGGCATGCATGTTGA
ATATGACCAAAGGCCTGATGTTTTCAGGGGAACAGTCCGTTATGCTAGTG
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