CB250353

Overview
NameCB250353
Unique NameCB250353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length367
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.024e-24
Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            W++PEEF PERFID PVD KG  FE LPFGSGRRICPGI + +   EL L NLLY FDW +P  +++    M+MEEA    LT+ KK PL L+PV
Sbjct:  411 WKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKD----MDMEEAG--DLTVDKKVPLELLPV 499          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.643e-24
Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 284
            W+ PE F+PERF+D  +D KGQ FE LPFG GRRICP I +G  M E  LANLLY FDWKLP G E    ++++EEA G  LT++KK  L+LVP
Sbjct:  404 WKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVE--VKDIDVEEAPG--LTVNKKNELLLVP 493          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.643e-24
Identity = 59/95 (62.11%), Postives = 68/95 (71.58%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            W++PEEF PERFID P+D KG  FE LPFGSGRRICPGI   +   EL L NLLY FDW+LP   EED  +++MEEA  V  T+ KK PL LVPV
Sbjct:  407 WKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDWRLP---EED-KDLDMEEAGDV--TIIKKVPLKLVPV 495          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.643e-24
Identity = 57/95 (60.00%), Postives = 67/95 (70.53%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            W  PEEF PERFID PVD +GQ FE LPFGSGRRICPG+ +G+   EL L NLLY FDWKLP+G      +++ EEA   +LT+ KK  L LVPV
Sbjct:  409 WTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHK--DIDTEEAG--TLTVVKKVHLKLVPV 499          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.452e-24
Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            W +PEEF PERFI+ PVD +GQ FE LPFGSGRRICPG+ LG+ + EL L NLLY FDW+ P+G      +++ EEA G+ LT+ KK PL LVPV
Sbjct:  409 WINPEEFNPERFINNPVDYRGQHFELLPFGSGRRICPGMGLGITIVELGLLNLLYFFDWRAPDGMTHK--DIDTEEA-GI-LTVVKKVPLKLVPV 499          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.888e-24
Identity = 54/98 (55.10%), Postives = 66/98 (67.35%), Query Frame = 3
Query:    3 WESPEEFIPERFI----DKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVP 284
            WE PEEF+PERF+    DK     GQDF YLPFGSGRRICPG N GL   E+ LANL+Y FDW++PN +E+ C  ++M+E  G  L L +   L LVP
Sbjct:  436 WEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFG--LMLRRNELLYLVP 531          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.888e-24
Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            W+ PE FIPERF+D  +D KG +FE LPFGSGRRICPGI +G+ +  L L NLLY FDWKLP G +    ++++EE+ G  L   KK PL L+PV
Sbjct:  401 WKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMK--VADVDLEESYG--LVCPKKIPLQLIPV 491          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.690e-24
Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            W +PEEF PERF+D  VD +GQ +E LPFGSGRRICPG+ +G+   EL L NLLY FDWKLP+G      +++ EEA   +LT+ KK PL LVPV
Sbjct:  409 WTNPEEFDPERFMDSSVDYRGQHYELLPFGSGRRICPGMPMGIAAVELGLLNLLYFFDWKLPDGMTHK--DIDTEEAG--TLTIVKKVPLQLVPV 499          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.004e-23
Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 296
            W+  + F PERF+D  +D KGQ+FE LPFGSGRRICPG+ +G  M E  LAN+LY FDW++P+G   +  +++MEE+ G  L + KK  L+LVPV YL
Sbjct:  405 WKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVE--DIDMEESPG--LAVGKKNELLLVPVKYL 498          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.237e-23
Identity = 57/95 (60.00%), Postives = 67/95 (70.53%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            WE+PEEF PERFID P+D KG  FE LPFGSGR+ICPGI  G+   EL L NLLY FDW+L    EED  +++MEEA     T+ KK PL LVP+
Sbjct:  410 WENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRL---AEED-KDIDMEEAG--DATIVKKVPLELVPI 498          
The following BLAST results are available for this feature:
BLAST of CB250353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71B4_ARATH2.024e-2458.95Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BW_ARATH2.643e-2458.51Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH2.643e-2462.11Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH2.643e-2460.00Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH3.452e-2460.00Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71C3_MAIZE5.888e-2455.10Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71BC_ARATH5.888e-2455.79Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH7.690e-2457.89Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH1.004e-2353.06Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH2.237e-2360.00Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionEST0147 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ214 similar to cytochrome P450 (acc # AAL24049), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250353 ID=CB250353; Name=CB250353; organism=Citrus sinensis; type=EST; length=367bp
ACTGGGAGAGTCCTGAAGAATTCATCCCAGAAAGGTTTATTGATAAGCCG
GTTGATGTTAAAGGACAAGATTTCGAATATTTACCATTTGGATCCGGCCG
AAGAATTTGTCCTGGGATTAATTTGGGATTAATAATGTCGGAGCTTGCGC
TTGCAAATCTCTTGTATTGTTTTGATTGGAAATTGCCGAATGGAAGGGAG
GAGGATTGTGTTAACATGAACATGGAGGAGGCAACTGGTGTGTCTCTCAC
TCTCTCTAAAAAGACGCCTCTTATCCTTGTGCCAGTCAATTACCTCCAGT
AGCATAGCCATCAGAAAAATGAAAGACAACAACAACATTGCTCTGTTGTA
ACTTCCTCAACTTCCTG
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