CB250353

Overview
NameCB250353
Unique NameCB250353
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length367
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB250353_ssr326 microsatellite CB250353_ssr326:326..337. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11819 contig Csv1_Contig11819:228..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.958e-21
Identity = 52/97 (53.61%), Postives = 61/97 (62.89%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 293
            WE PE F PERF     D  G DFE++PFG+GRRICPG+N GL   E+ LA LLY FDWKL  G      +M+M EA G  LT  +K  L+LVP  Y
Sbjct:  404 WEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPS--DMDMSEAEG--LTGIRKNNLLLVPTPY 496          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.039e-20
Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            WE+P +F PERF+ +  DVKG+DFE +PFGSGRR+CPGI++ L    + LA+LLY FDWKL NG      N++M E  G  LTL K   L  VPV
Sbjct:  416 WENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPG--NIDMSETFG--LTLHKAKSLCAVPV 506          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.039e-20
Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPV 287
            WE+   F PERF+ K +D++G+D+E  PFG+GRRICPG+ L +    L LA+LLY FDWKLPNG   +  +++M+E  G  LTL K  PL  VPV
Sbjct:  416 WENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSE--DLDMDETFG--LTLHKTNPLHAVPV 506          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.039e-20
Identity = 52/98 (53.06%), Postives = 63/98 (64.29%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 296
            W+ P+EFIPERF+D  V+ KG  FE LPFGSGRR CP + +GL   E  LANLLY FDWK           +++EEA G  LT  +K PL LVPVN +
Sbjct:  411 WKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKATE-------EVSVEEAPG--LTSHRKHPLHLVPVNVI 499          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.024e-20
Identity = 46/98 (46.94%), Postives = 64/98 (65.31%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYL 296
            W   E F PERF++  +D +G DFE++PFG+GRRICPGI   +   EL LA LLY FDWKLPN  + +   ++M E+ G+  TL ++  L L+P+  L
Sbjct:  416 WGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNE--ELDMTESNGI--TLRRQNDLCLIPITRL 509          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.949e-20
Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 293
            WE P+ F PERF     D  G DFE++PFG+GRRICPG+N GL   E+ LA LLY FDWKL  G +    +M+M EA G  LT   K  L+LVP  Y
Sbjct:  402 WEKPDTFWPERFDQVSKDFMGNDFEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPS--DMDMSEAEG--LTGILKNNLLLVPTPY 494          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.736e-20
Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKP---VDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNYLQ*HSHQKNE 323
            WE+P EFIPERF+ +    ++ +G DFE +PFG+GRRIC G  +G++M E  L  L++ FDWKLPN    D V++NMEE  G  L L K  PL  +    L    +Q +E
Sbjct:  408 WENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPN----DVVDINMEETFG--LALQKAVPLEAIVTPRLSFDIYQSSE 511          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.149e-19
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 293
            W   + FIPERF D  +D KG  FEY+PFG+GRR+CPG+  GL    L LA LLY F+W+LPN  + +  +++M+E  G  +T+++K  L L+P  Y
Sbjct:  409 WSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPE--DLDMDEHFG--MTVARKNKLFLIPTVY 501          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.501e-19
Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 293
            WE P+ F PERF +   D  G DFE++PFG+GRRICPG++ GL   E+ LA LLY FDWKLP G  +   +++M E  G  L+  KK  + LVP  Y
Sbjct:  401 WEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTD--ADLDMTETPG--LSGPKKKNVCLVPTLY 493          
BLAST of CB250353 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.501e-19
Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 3
Query:    3 WESPEEFIPERFIDKPVDVKGQDFEYLPFGSGRRICPGINLGLIMSELALANLLYCFDWKLPNGREEDCVNMNMEEATGVSLTLSKKTPLILVPVNY 293
            WE P+ F PERF +   D  G DFE++PFG+GRRICPG++ GL   E+ LA LLY FDWKLP G  +   +++M E  G  L+  KK  + LVP  Y
Sbjct:  401 WEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTD--ADLDMTETPG--LSGPKKKNVCLVPTLY 493          
The following BLAST results are available for this feature:
BLAST of CB250353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
C71DD_MENPI7.958e-2153.61Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C76C3_ARATH1.039e-2053.68Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH1.039e-2051.58Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71B6_ARATH1.039e-2053.06Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71DA_SOYBN3.024e-2046.94Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71DF_MENPI3.949e-2052.58Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C75A2_SOLME6.736e-2045.45Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71D8_SOYBN1.149e-1946.39Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71DI_MENSP1.501e-1949.48Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR1.501e-1949.48Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionEST0147 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ214 similar to cytochrome P450 (acc # AAL24049), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250353 ID=CB250353; Name=CB250353; organism=Citrus sinensis; type=EST; length=367bp
ACTGGGAGAGTCCTGAAGAATTCATCCCAGAAAGGTTTATTGATAAGCCG
GTTGATGTTAAAGGACAAGATTTCGAATATTTACCATTTGGATCCGGCCG
AAGAATTTGTCCTGGGATTAATTTGGGATTAATAATGTCGGAGCTTGCGC
TTGCAAATCTCTTGTATTGTTTTGATTGGAAATTGCCGAATGGAAGGGAG
GAGGATTGTGTTAACATGAACATGGAGGAGGCAACTGGTGTGTCTCTCAC
TCTCTCTAAAAAGACGCCTCTTATCCTTGTGCCAGTCAATTACCTCCAGT
AGCATAGCCATCAGAAAAATGAAAGACAACAACAACATTGCTCTGTTGTA
ACTTCCTCAACTTCCTG
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