CB250359

Overview
NameCB250359
Unique NameCB250359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADXL_MOUSE (Adrenodoxin-like protein, mitochondrial OS=Mus musculus GN=Fdx1l PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.284e-27
Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = 1
Query:   85 FSTTAEN----DASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 477
            F TT E     +A+      +D++NV FVD+ G+   ++  VG ++L  A  + ++LEGACE SLACSTCHV V +  + + L  P + E+DMLD+A  L E SRLGCQIV +PEL+G+  A+P  TRNF VDG+
Sbjct:   36 FGTTGERRAGEEAADSPELPRDVVNVVFVDRSGKRIPVRGKVGDNVLYLAQRHGVDLEGACEASLACSTCHVYVSEA-HLDLLPPPEEREDDMLDMAPLLQENSRLGCQIVLTPELEGVEFALPKITRNFYVDGH 169          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADXL_HUMAN (Adrenodoxin-like protein, mitochondrial OS=Homo sapiens GN=FDX1L PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.735e-27
Identity = 62/126 (49.21%), Postives = 83/126 (65.87%), Query Frame = 1
Query:  100 ENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 477
            E DA  G  +  D++NV FVD+ G+   +   VG ++L  A  + ++LEGACE SLACSTCHV V + D+ + L  P + E+DMLD+A  L E SRLGCQIV +PEL+G    +P  TRNF VDG+
Sbjct:   55 EEDAG-GPERPGDVVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGVDLEGACEASLACSTCHVYVSE-DHLDLLPPPEEREDDMLDMAPLLQENSRLGCQIVLTPELEGAEFTLPKITRNFYVDGH 178          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADXL_BOVIN (Adrenodoxin-like protein, mitochondrial OS=Bos taurus GN=FDX1L PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.735e-27
Identity = 61/130 (46.92%), Postives = 84/130 (64.62%), Query Frame = 1
Query:   88 STTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 477
            S  A  + + G  +  D++NV FVD+ G+   +   VG ++L  A  + ++LEGACE SLACSTCHV V + D+ + L  P + E+DMLD+A  L E SRLGCQIV +PEL+G    +P  TRNF VDG+
Sbjct:   53 SRPAGEEEAGGPERPGDVVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGLDLEGACEASLACSTCHVYVSE-DHLDLLPPPDEREDDMLDMAPLLQENSRLGCQIVLTPELEGAEFTLPKITRNFYVDGH 181          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADXL_XENLA (Adrenodoxin-like protein, mitochondrial OS=Xenopus laevis GN=fdx1l PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 4.878e-27
Identity = 61/127 (48.03%), Postives = 87/127 (68.50%), Query Frame = 1
Query:  100 ENDASHG-SNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 477
            E+DA +  +   ++ + V F+D+ G+   +K  VG S+L  AH  +IELEGACE SLACSTCHV V + +Y++KL +P + E+DMLD+A  L E SRLGCQI+ + +L+G    +P  TRNF VDG+
Sbjct:   63 ESDAENQRAELSEETVEVVFLDRSGQRIPVKGKVGESVLCLAHRYNIELEGACESSLACSTCHVYV-NTEYFHKLPEPDEREDDMLDMAPLLQENSRLGCQIILTKQLNGAEFTLPKITRNFYVDGH 188          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADX_SHEEP (Adrenodoxin OS=Ovis aries GN=FDX1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.865e-24
Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 1
Query:  124 NKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 450
            +  +D + V F+++DGE    K  VG S+L+   EN+++++G  ACEG+LACSTCH+I  +   Y KLE  TDEENDMLDLA+GLT+ SRLGCQI  +  +D + + +P A
Sbjct:    1 SSSEDKVTVNFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLI-FEQHIYEKLEAITDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPDA 110          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADX_HUMAN (Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.610e-24
Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = 1
Query:  109 ASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIP 444
            ++   +  +D I V F+++DGE    K  VG S+L+   EN+++++G  ACEG+LACSTCH+I  D   Y KL+  TDEENDMLDLA+GLT+ SRLGCQI  +  +D + + +P
Sbjct:   56 SARARSSSEDKITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFED-HIYEKLDAITDEENDMLDLAYGLTDRSRLGCQICLTKSMDNMTVRVP 168          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADX_MOUSE (Adrenodoxin, mitochondrial OS=Mus musculus GN=Fdx1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.469e-23
Identity = 54/116 (46.55%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  109 ASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 450
            ++   +  +D I V F ++DGE    K  +G S+L+   EN+++++G  ACEG+LACSTCH+I  D   Y KL+  TDEENDMLDLAFGLT+ SRLGCQ+  +  +D + + +P A
Sbjct:   60 SARARSSSEDKITVHFKNRDGETLTTKGKIGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFED-HIYEKLDAITDEENDMLDLAFGLTDRSRLGCQVCLTKAMDNMTVRVPEA 174          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADX_RAT (Adrenodoxin, mitochondrial OS=Rattus norvegicus GN=Fdx1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.505e-23
Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 1
Query:  109 ASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 450
            ++   +  +D + V F ++DGE    K  VG S+L+   EN+++++G  ACEG+LACSTCH+I  D   Y KL+  TDEENDMLDLAFGLT  SRLGCQ+  +  +D + + +P A
Sbjct:   60 SARARSSSEDKVTVHFKNRDGETLTTKGKVGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFED-HIYEKLDAITDEENDMLDLAFGLTNRSRLGCQVCLTKAMDNMTVRVPEA 174          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADX_PIG (Adrenodoxin, mitochondrial OS=Sus scrofa GN=FDX1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 3.272e-23
Identity = 61/154 (39.61%), Postives = 94/154 (61.04%), Query Frame = 1
Query:    1 TRQHWRPFIELQSVPRVFQGSIFQKYPHFSTTAE--NDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 450
            T   W+P +  ++  R   GSI+      +  A   + ++   +  +D I V F+++DG+    +  VG S+L+   EN+++++G  ACEG+LACSTCH+I  D   + KLE  TDEENDMLDLA+GLT+ SRLGCQI  +  +D + + +P A
Sbjct:   16 TAVRWQPLVGPRAGNRGPGGSIWLGLGGRAAAARTLSLSARAWSSSEDKITVHFINRDGKTLTTQGKVGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFED-HIFEKLEAITDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPEA 168          
BLAST of CB250359 vs. ExPASy Swiss-Prot
Match: ADX_BOVIN (Adrenodoxin, mitochondrial OS=Bos taurus GN=FDX1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 3.272e-23
Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  109 ASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 450
            +    +  +D I V F+++DGE    K  +G S+L+   +N+++++G  ACEG+LACSTCH+I  +   + KLE  TDEENDMLDLA+GLT+ SRLGCQI  +  +D + + +P A
Sbjct:   54 SGRAQSSSEDKITVHFINRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLI-FEQHIFEKLEAITDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPDA 168          
The following BLAST results are available for this feature:
BLAST of CB250359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
ADXL_MOUSE1.284e-2746.67Adrenodoxin-like protein, mitochondrial OS=Mus mus... [more]
ADXL_HUMAN3.735e-2749.21Adrenodoxin-like protein, mitochondrial OS=Homo sa... [more]
ADXL_BOVIN3.735e-2746.92Adrenodoxin-like protein, mitochondrial OS=Bos tau... [more]
ADXL_XENLA4.878e-2748.03Adrenodoxin-like protein, mitochondrial OS=Xenopus... [more]
ADX_SHEEP3.865e-2448.65Adrenodoxin OS=Ovis aries GN=FDX1 PE=1 SV=2[more]
ADX_HUMAN8.610e-2447.37Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1... [more]
ADX_MOUSE1.469e-2346.55Adrenodoxin, mitochondrial OS=Mus musculus GN=Fdx1... [more]
ADX_RAT2.505e-2346.55Adrenodoxin, mitochondrial OS=Rattus norvegicus GN... [more]
ADX_PIG3.272e-2339.61Adrenodoxin, mitochondrial OS=Sus scrofa GN=FDX1 P... [more]
ADX_BOVIN3.272e-2344.83Adrenodoxin, mitochondrial OS=Bos taurus GN=FDX1 P... [more]

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Properties
Property NameValue
Genbank descriptionEST0153 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ222 similar to andrenodoxin-like ferredoxin 1 (acc# AAL82812), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250359 ID=CB250359; Name=CB250359; organism=Citrus sinensis; type=EST; length=478bp
ACTCGTCAACATTGGCGACCCTTTATTGAATTACAGTCGGTCCCTAGGGT
TTTCCAAGGGTCCATATTTCAGAAGTATCCACATTTTTCTACCACAGCTG
AAAATGATGCTTCTCATGGAAGCAACAAACAGAAAGACATGATAAACGTG
ACATTTGTTGATAAGGATGGAGAAGAAAAGAACATTAAGGTCCCAGTTGG
AATGTCTATGTTAGAAGCGGCTCATGAAAATGATATAGAACTTGAAGGTG
CATGTGAAGGCTCGCTTGCCTGCTCAACATGTCATGTGATTGTGATGGAC
ATGGACTACTACAATAAATTAGAAGACCCAACTGATGAAGAAAATGACAT
GTTGGATCTTGCTTTTGGGCTTACAGAGACGTCTCGTCTGGGATGTCAAA
TAGTAGCAAGCCCTGAACTTGACGGAATTCGCTTGGCAATTCCTGCTGCC
ACCCGAAACTTTGCTGTAGATGGTTACG
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