CB250370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 3.070e-41 Identity = 70/117 (59.83%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAG 342 +ALFN+G SCG CY++ C++ +P+WCL G ++ +T TN CPPN ALS+++GGWCNPP HFDMAEPA+LQI Y+AGIVP+ ++R+PC K+GG+RFT+ G +YF LVLI+NV G+G Sbjct: 72 SALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSG 188
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 5.237e-41 Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCEN--DPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAG 342 T LFN+G SCG CY + C+ D ++C+ G S+ +TATN CPPN AL ND GGWCNPP QHFDMAEPA+L+I Y GIVP+ ++R+PCAK+GG+RFT+NG YF LVL++NVGG G Sbjct: 74 TVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVG 190
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.524e-40 Identity = 71/116 (61.21%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGD 345 TALF+ GLSCG+C+E+ C NDP+WC+ G SI+VTATNFCPP GG C+PP HFD+++P + +IA Y++GI+P+ +RR+ C + GGIRFT+NGHSYFNLVL+TNVGGAGD Sbjct: 78 TALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGD 185
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 2.599e-40 Identity = 69/117 (58.97%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCE-NDPKWCLPG--SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAG 342 +ALFN+G CG+CY + C+ + KWC PG SI +TATN CPPN AL +++GGWCNPP QHFDM++PA+ IA Y+AGIVP++++R+PC + GGIRF ++GH YF LV +TNVGG+G Sbjct: 68 SALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSG 184
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 2.599e-40 Identity = 68/115 (59.13%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGD 345 TALFN G +CG+CY++ C NDP+WCLPGS+ +TATNFCPP+ S G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD Sbjct: 88 TALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGD 200
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 4.434e-40 Identity = 69/116 (59.48%), Postives = 94/116 (81.03%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCE-NDPKWCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAG 342 +ALFN+G +CG CY++ C+ ++ KWC G S+ +TATN CPP+ + +++GGWCNPP QHFDMA+PA+ QI YR GIVP++F+R+ C +KGG+RFT+NG+SYF LVLITNVGG G Sbjct: 64 SALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPG 179
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 7.563e-40 Identity = 68/115 (59.13%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGD 345 TALFN+G +CG+CYE+ C DP+WCLPGS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VLI NVGGAGD Sbjct: 98 TALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGD 210
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 7.563e-40 Identity = 68/115 (59.13%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGD 345 TALFN+G +CG+CYE+ C DP+WCLPGS+ +TATNFCP N + + D WCNPP +HFD++ FL+IA+Y+AG+VP+ +RRIPC+K GG++F G+ YF +VLI NVGGAGD Sbjct: 92 TALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGD 204
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 1.685e-39 Identity = 67/115 (58.26%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDPKWCLPGSIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAGD 345 TALFN G +CG+CY++ C +DP+WCLPG+I +TATNFCPP+ S G WCNPP +HFD++ P FL+IAQY+AG+VP+ +RRI CA+ GG++F G+ YF ++L NVGGAGD Sbjct: 95 TALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDY--SKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGD 207
BLAST of CB250370 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.092e-38 Identity = 68/116 (58.62%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 1 TALFNNGLSCGSCYEMKCENDPK-WCLPG-SIIVTATNFCPPNLALSNDNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRIPCAKKGGIRFTVNGHSYFNLVLITNVGGAG 342 +ALFN+G CG+CY + C+ WC PG SI +TATN CPPN A +D GGWCNPP +HFDM++PA+ IA Y+AGIVP++F+R+PC K GGIRFT++G YF LV + NVGG+G Sbjct: 63 SALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSG 178 The following BLAST results are available for this feature:
BLAST of CB250370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250370 ID=CB250370; Name=CB250370; organism=Citrus sinensis; type=EST; length=346bpback to top |