CB290204

Overview
NameCB290204
Unique NameCB290204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12
Identity = 53/207 (25.60%), Postives = 101/207 (48.79%), Query Frame = 2
Query:  131 RLPPGPT-PYPVIGNLLELGNKPHKSLAKL-AKI-HGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA--GTAIHIGQAAFDTTLNLISNTIF-SIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDL 733
            RLPP P    P+IG+L  +G+ PH S   L AK  H  +M ++ G V T+V S+   A+ +L+  D    +R          ++   + + P    WR  RK+ N+H  S++ + + +  R ++++ ++A +++   A  GTA+ + +       + +   +          +K  RE  +T+  ++   G  N+ D+FP L ++DL
Sbjct:   54 RLPPTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALL---GGFNVEDYFPKLADVDL 257          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12
Identity = 51/194 (26.29%), Postives = 96/194 (49.48%), Query Frame = 2
Query:   35 MDTVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDL 616
            M+ ++ + + +  WI+      F R  +  S   PP P   P+IG+L +L   PH+SL +LAK++G + SL  G   TVV +  +  K++   Q  +F NR  P +I    + + G+ +      W+  RK+ +S A +  ++    +L  K+ ++L+  + E        H  +     +LN+I + +FS ++
Sbjct:    1 MNLINLILYFILFWIVFD----FIRKNRRISFNDPPSPWALPIIGHLHKLSLNPHRSLTELAKVYGGVYSLHIGDSKTVVITDVSAFKDVTIKQFKNFANRPQPKSIRVITNFK-GLAFADY-DQWQKTRKLVSS-ALTKTKIKTFNNLIEKQTENLIESMNEFSNKNELFHPRKYLTKYSLNIILSMLFSKEI 187          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12
Identity = 42/147 (28.57%), Postives = 73/147 (49.66%), Query Frame = 2
Query:   71 SWILVVALNYFSRGFKSGSRRLPPG--PTPYPVIGNLLELGNK--PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQ 499
            ++I +++L +F   F   S    P      +P++G+L  + N   PHK+L  L   +GPI ++K G    +V S+  +AKE     D    +R  P A+    +++  + W P    WR LRKI      S+R+++   H+R  ++Q
Sbjct:   12 AFISLISLLFFLFRFSKVSHTKEPPIISGSWPLLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQ 158          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.469e-12
Identity = 55/211 (26.07%), Postives = 101/211 (47.87%), Query Frame = 2
Query:  140 PGPTPYPVIGNLLELG-NKPHKSLAKLAKIHGP--IMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFG--MPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFS--IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLXGIRRR 751
            PGP  +P+IG+L+++    PH+ L  LA++HG   +MS   G    V+ S   +A+E+L +    F NR +  +        FG  + + P    WR LR+I ++H F+ R++ A++  R+  +  +L  +Q+   +   + + +      LN I  ++F    D++    +  +  +  + G  +  G  N +D  P L  LD   I  R
Sbjct:   80 PGPKGWPIIGSLMDMSVGLPHRKLESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLTSPH--FANRPLKQSAQ---QLLFGRAIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVRRHLQGAALNNIMGSVFGRRFDMSHENEEVKKLREMVDEG-FQLLGAFNWADHLPWLRPLDPLRIHAR 284          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.469e-12
Identity = 53/204 (25.98%), Postives = 100/204 (49.02%), Query Frame = 2
Query:  134 LPPGPTPYPVIGNLLELGNKPHKSLAKLAKIHGP-IMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCN--RTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIF-SIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDL 733
            LP  P   P+IG+L  +G+ P+ SLA LA  +GP +M L+ G V TVV SS  +A+ +L+  D  F +  R++   I  +G  +    + P    +R  RK+   H  ++ ++ + +  R ++++  L  V+    A   + + +       NL+   +     + +  ++  RE    N G++   G  ++ D+FP L  ++L
Sbjct:   68 LPSPPMKLPIIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATD--SCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLL---GGFHIQDYFPRLGRIEL 266          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.615e-11
Identity = 42/161 (26.09%), Postives = 87/161 (54.04%), Query Frame = 2
Query:   29 LKMDTVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLL 508
            +++D +S +  L+ ++I+ + +N + +      + LPP P   PVIG+L  L G  P      +A+ +GP+  ++ G+V +VV SSA  AK+ ++  D +F +R          + +  + + P    WR +R+IC +   S + + +  ++R+++I+ L+
Sbjct:    1 MELDLLSAIIILVATYIVSLLINQWRKS--KSQQNLPPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLI 159          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.615e-11
Identity = 42/161 (26.09%), Postives = 87/161 (54.04%), Query Frame = 2
Query:   29 LKMDTVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLEL-GNKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLL 508
            +++D +S +  L+ ++I+ + +N + +      + LPP P   PVIG+L  L G  P      +A+ +GP+  ++ G+V +VV SSA  AK+ ++  D +F +R          + +  + + P    WR +R+IC +   S + + +  ++R+++I+ L+
Sbjct:    1 MELDLLSAIIILVATYIVSLLINQWRKS--KSQQNLPPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLI 159          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.110e-11
Identity = 51/173 (29.48%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   35 MDTVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 541
            MD +     LL S++ ++     S+  +    +LPPGP P PV GN L++G+   H++L  LAK  G I+ L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +   ++   ++   ++  V++N  A T
Sbjct:    1 MDLLLLEKTLLGSFVAILVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAAT 169          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.110e-11
Identity = 52/173 (30.06%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   35 MDTVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 541
            MD +     LL S++ V+     S+  +    +LPPGP P PV GN L++G+   H++L  LAK  G I  L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR +R+I     F+++ +   ++   ++   ++  V++N  A T
Sbjct:    1 MDLLLLEKTLLGSFVAVLVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAAT 169          
BLAST of CB290204 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.110e-11
Identity = 62/256 (24.22%), Postives = 110/256 (42.97%), Query Frame = 2
Query:   29 LKMDTVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGNK--PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNLRKICNSHAFSSRQLDANQHLR-------RKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTI-----FSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLXGIRRRM 754
            L ++T++    L   ++ +      SRG     +  P     +P++G+L  L     PHK L  LA  +GP+ ++K G    +V S+  M+KE+    D +  +R    A+    +++  +   P    WR LRKI      S+R+++   H+R        K++ D+ +   +N    T + I Q     T N++   +     F +   +   K A+ F +     M   G   ++D  P L  LDL G  + M
Sbjct:    8 LNLNTIAIASILSLIFLCLFLYRKNSRG-----KDAPVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDK-AQRFMKNIREFMNLMGTFTVADGVPCLRWLDLGGHEKAM 257          
The following BLAST results are available for this feature:
BLAST of CB290204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
C71C1_MAIZE3.255e-1225.60Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C519B_DICDI3.255e-1226.29Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
C82A1_PEA7.250e-1228.57Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C78A4_PINRA9.469e-1226.07Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71C4_MAIZE9.469e-1225.98Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71DI_MENSP1.615e-1126.09Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR1.615e-1126.09Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
TCMO_POPTM2.110e-1129.48Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI2.110e-1130.06Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C82A3_SOYBN2.110e-1124.22Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa08_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290204 ID=CB290204; Name=CB290204; organism=Citrus sinensis; type=EST; length=797bp
GCCCGTTGTTCAACAAAAGAGAGCGAGATTAAAGATGGATACGGTAAGCT
GCGTACCATGGCTTCTATTCTCGTGGATTTTGGTCGTCGCTTTAAATTAC
TTTTCAAGAGGATTCAAATCTGGATCCAGAAGGCTTCCACCGGGACCGAC
GCCTTATCCGGTGATCGGAAACCTCCTGGAACTCGGCAACAAACCTCACA
AGTCACTTGCTAAACTTGCCAAGATTCATGGCCCCATAATGAGTCTAAAA
TTTGGCCAGGTGACCACAGTTGTCTTTTCTTCTGCAGCCATGGCCAAAGA
AATCCTTCAAAATCAAGACACATCTTTCTGTAATCGAACAATCCCAGACG
CAATCTACGCCCACGGCCATCATGAATTCGGGATGCCCTGGCTGCCTGTG
GCGACACTGTGGAGAAATCTTCGAAAAATATGCAACTCACATGCTTTCTC
TAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCCAAG
ATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATACAT
ATTGGCCAAGCTGCTTTCGACACTACGCTTAATTTGATATCCAACACAAT
TTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGTTTA
AGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTGTCC
GATTTTTTTCCTGTGCTTGAGAATCTTGACTTGNCAGGTATAAGGCGTCG
CATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
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