CB290211

Overview
NameCB290211
Unique NameCB290211
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length769
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:631..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_METMP (Putative thiazole biosynthetic enzyme OS=Methanococcus maripaludis GN=MMP1352 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15
Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+   +  EDLI+K  +V GVV     +         +DP  + AK V+ S GHD     T  ++ K +G+  EVPG K++  +  E+++ R TREV PG+ V GM         RMG  FG M +SG+K A L L+ L
Sbjct:  126 KILTGIVVEDLILKEDKVSGVVIQSYSIEK---AGLHIDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREVFPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.020e-15
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+   +  ED+I+K G+V GVV N   ++        +DP  + AK V+ + GHD     T  ++ + +G++  +PG K+L  +  E+ +++ T+E+ PG+ V GM      G  RMG  FG M ISG+  A + L+ L
Sbjct:  127 KVLTGIVVEDVILKEGKVSGVVINSYAINK---AGLHIDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGAVFGGMYISGKIVADMILEKL 260          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_SULIY (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1786 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_SULIM (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1670 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_SULIL (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1798 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_SULIK (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1717 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_SULIA (Putative thiazole biosynthetic enzyme OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1786 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+ + V  +D+I +    RV GV   W    M       +DP  + AK VV + GHD    +   +++  +G++  +PG K+     AE+  V  T +V  G+   GM V E+ G PRMGP FGAM++SG+  A    K L
Sbjct:  125 KIIHGVTVDDVIFRENPLRVAGVAVEWTATQM---ASLHVDPIFISAKAVVDATGHDAEVISVAARKIPELGIV--IPGEKSAYSERAEELTVINTGKVAEGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKAVAEEITKDL 260          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.333e-15
Identity = 52/159 (32.70%), Postives = 88/159 (55.35%), Query Frame = -3
Query:  288 TSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL-KSIGMIEEVP-----GMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 746
            TST+ S+   +  +K+FN ++ ED++++   + G+V NW+ V M       +DP  + A+ V+ + GHD       VK + + IG     P     G +++  +  E A++  TREV P + V GM    + GAPRMGP FG M++SG++ A + ++ L
Sbjct:  107 TSTLCSRA-CQAGLKIFNLMSIEDVMIRDEGITGLVLNWSSVEM---AGLHVDPLTVRARAVIDATGHDCEI----VKVVERKIGPELNTPDGRIQGERSMWADVGEAALIENTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 257          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.740e-15
Identity = 50/141 (35.46%), Postives = 80/141 (56.74%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIE-EVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            ++FN V+ ED++++   RV G+V NW  V+     +  +DP ++  K+V+   GH+     T ++++ +  + E  + G K +     E   V  T+E+ PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct:  120 EVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLLGEKPMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257          
BLAST of CB290211 vs. ExPASy Swiss-Prot
Match: THI4_PYRIL (Putative thiazole biosynthetic enzyme OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_1998 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.969e-15
Identity = 49/141 (34.75%), Postives = 77/141 (54.61%), Query Frame = -3
Query:  288 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 704
            K+   V  +D+I +G   RV G++  W  + M+    S +DP   +AK V+ + GHD    +   +++  +G+  EV G K+     +E  +V  T  V PG+ V GM V  + G PRMGP FG M++SG++AA +  K L
Sbjct:  117 KIILGVHVDDVIFRGDPPRVVGLLWVWTPIQMSG---SHVDPLYTQAKAVLDATGHDAEVISIAARKVPELGI--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYVAGMAVCTVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252          
The following BLAST results are available for this feature:
BLAST of CB290211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
THI4_METMP1.020e-1536.69Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_META31.020e-1533.09Putative thiazole biosynthetic enzyme OS=Methanoco... [more]
THI4_SULIY1.333e-1534.04Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIM1.333e-1534.04Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIL1.333e-1534.04Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIK1.333e-1534.04Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_SULIA1.333e-1534.04Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]
THI4_METTH1.333e-1532.70Putative thiazole biosynthetic enzyme OS=Methanoba... [more]
THI4_METAC1.740e-1535.46Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_PYRIL2.969e-1534.75Putative thiazole biosynthetic enzyme OS=Pyrobacul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290211 ID=CB290211; Name=CB290211; organism=Citrus sinensis; type=EST; length=769bp
AAAGGACAAAGAAATTAAAATTACAGGTTCCATGATGGACCGCAAACAAA
CACTTTATTCACAAAACCTCACAACATTATCTCATTATTCGCATCAACCA
TCCATCACAACCACCTAAATACAACTACTTTTTTGCCAGAGTTTATTTGC
ATGCACACAGCTGATGAGTGATGATGCCTGTTATTACCAAATTAAGCATC
AGCAGTCTCAGCAAAATCAGCTGCAGCTAAAATCAGCTCAGGGTGAACGC
CTCCCACATATGTACCGTCTAATGCATTCGGCTGGCCCAGTGACTTCAAC
GCCAAATGCGCAGCCTTCTGCCCCGATATCATCATTGCTCCAAATGTTGG
CCCCATTCGAGGAGCACCATCAATCTCGGCAACTTCCATGCCGGTAACTA
TCATACCAGGCACAACCTCCCTGGTCAGCCTCACAATAGCATCTTCTGCA
GAGTTCATGTCCAGTGCCTTCATTCCAGGCACTTCCTCAATCATTCCGAT
ACTCTTCAACCTCTTTACTCCAGTGGCCCCAAAAGGCCCATCATGGCCAC
AAGAGCTCACAACCACCTTCGCTTCCATTACATTGGGATCCATGCAAGAC
TGTGTATCGTGATTCATTGACACCAACGCCCAGTTGGTCACCACACCACC
AACTCTGCCGCCTTTGACTATCAAGTCCTCGGCTGCCACTGCATTAAAGA
GCTTGACGTTGGGGCGGGCCAGGAGCTTGCTCATTATAGTGGAGGTGAAC
AGCGCTGCATGCTTGATCA
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