CB290217

Overview
NameCB290217
Unique NameCB290217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 7.175e-30
Identity = 78/184 (42.39%), Postives = 109/184 (59.24%), Query Frame = 1
Query:  208 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN--RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIID--NGGIDTEKDYPY 747
            A + ++  +HGKA+    E+  RF  FK+N++     N++N    Y V   +FADLT +E+  ++L   + A+   LK  + + ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A  +I+   NG + TE  YPY
Sbjct:   40 AHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVS-GKFADLTPQEFAKLYLNPDYYARH--LKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY 219          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 7.175e-30
Identity = 74/194 (38.14%), Postives = 108/194 (55.67%), Query Frame = 1
Query:  193 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            D  + A ++ W  K+ K+Y+ + E+ KR  +++ENL+ I  HN EN   K G    +N FAD T EE+R         A  T+  +++      +V   LP+  DWRK+G V  V++QG CGSCWAF+ + A+EG     TG+L  LS Q L+DC  S  N GC  G    AF +++ N G++ E  YPY+  D
Sbjct:   22 DPNLDAEWQDWKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQK------QVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKD 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.224e-29
Identity = 71/182 (39.01%), Postives = 104/182 (57.14%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            FE +L K  K Y++  EK +RF+IF+ NL  I   N  + T +  +N+F+DL+ +E  S + G     +  +          P  G   P   DWR+   V  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+L+DCD   + GCNGGL+  A+E ++  GG+  E DYPY+  D
Sbjct:   28 FEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPPDKG---PLEFDWRRLNKVTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCD-YVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSD 205          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.598e-29
Identity = 76/183 (41.53%), Postives = 103/183 (56.28%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEH-NSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG-INKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAI 756
            F+ W   H K +    E   RF +F +N +F++ + N+E       LN FAD+T+EE+   HLG  +    T+   K + +       A P+SVDWR    +   KDQG CGSCW F T A +EG +NK + G L S SEQ+LVDCD S N GC GG    + +FI +N G+  E DYPYKA+
Sbjct:   18 FKQWAATHNKVFANRAEYLYRFAVFLDNKKFVEANANTE-------LNVFADMTHEEFIQTHLGMTYEVPETTSNVKAAVK-------AAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDL-GKLYSFSEQQLVDCDASDN-GCEGGHPSNSLKFIQENNGLGLESDYPYKAV 182          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.727e-29
Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 1
Query:  166 ESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPY 747
            E  S++   D  +   +  W  KHGKAYN + E+  R  ++++N + I+ HN E       + + +N F DLTN E+  M  G R        K KR + +       +P  VDWR  G V  VK+QG C S WAFS   ++EG     TG L+ LSEQ L+DC  ++    C+GG M  AF+++ DNGG+ TE+ YPY
Sbjct:   13 EIDSTAPTLDPSLDVQWNEWRTKHGKAYN-VNEERLRRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFR------RQKIKRMHVFQDHQFLYVPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDCMGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPY 204          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.561e-29
Identity = 72/184 (39.13%), Postives = 108/184 (58.70%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR----YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKA 753
            FE +L K  K Y++  EK +RF+IF+ NL  I   N  + + +  +N+F+DL+ +E  S + G        SL  ++ N      L R  +  P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+L+DCD   + GC+GGL+  A+E +++ GGI  E DYPY+A
Sbjct:   28 FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGL-------SLPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCD-FVDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEA 203          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.561e-29
Identity = 75/196 (38.27%), Postives = 107/196 (54.59%), Query Frame = 1
Query:  193 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPR--VGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            D  + A ++ W +K+ K+Y+   EK KR  +++E L+ I  HN EN   K G    +N F D T+EE+R M +         S+ + R  + + +   G  LP  VDWRKKG V  V+ QG C +CWAF+   A+E      TG L  LS Q LVDC     N GC GG    AF++++ NGG+++E  YPY+  D
Sbjct:   22 DSSLDAEWQDWKIKYNKSYSLKEEKLKRV-VWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMI-------EISVWTHREGKSIMKREAGSILPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD 209          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.651e-29
Identity = 71/182 (39.01%), Postives = 104/182 (57.14%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEAL-PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAI 756
            FE ++ ++ K Y++  EK+ R+ IF+ N+  I+  NS N +    +NRFAD+T  E  + H G   G    +         +   G+   P + DWR    V  VKDQG CG+CWAF+ + A+E    I    LI L+EQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DYPYKA+
Sbjct:   40 FEKFISQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGLASGDIGANFCE---TIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCD-FVDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAV 217          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.651e-29
Identity = 71/185 (38.38%), Postives = 110/185 (59.46%), Query Frame = 1
Query:  199 EVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYK 750
            ++ ++F+ +++ + + Y +  E   R  +F  N+    +  + +R T + G+ +F+DLT EE+R+++L      K    K K++      VG+  P   DWR KGAV +VKDQG CGSCWAFS    VEG   +  G+L+SLSEQEL+DCD   ++ C GGL   A+  I + GG++TE DY Y+
Sbjct:  182 KMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNTLL-RKEPGNKMKQAKS----VGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD-KMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQ 360          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.074e-29
Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTS--LKSKRSNRYLPRVG---EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPYK 750
            ++ W +K+ K Y+   E  KR  +++EN++ I+ HN EN     TY + +N FAD+T+EE++ M +G +     T   L  +    + P      +ALP  VDWR +G V  V+ QG C SCWAF    A+EG     TG LI LS Q L+DC     N GC  G    AF++++ NGG++ E  YPY+
Sbjct:   29 WQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYE 216          
The following BLAST results are available for this feature:
BLAST of CB290217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP1_LEIPI7.175e-3042.39Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATJ_RAT7.175e-3038.14Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATV_NPVHC1.224e-2939.01Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
ACP1_ENTHI1.598e-2941.53Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
TEST2_MOUSE2.727e-2937.69Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATV_NPVAP3.561e-2939.13Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATR_MOUSE3.561e-2938.27Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATV_NPVMC4.651e-2939.01Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATF_HUMAN4.651e-2938.38Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATQ_RAT6.074e-2938.10Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ab04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ab04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290217 ID=CB290217; Name=CB290217; organism=Citrus sinensis; type=EST; length=759bp
GTCTTTAGCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAATAGTT
CTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTT
TACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCT
TATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGA
GGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATA
ACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTT
AGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTT
GAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGG
GTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAAC
CGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAG
GAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTT
GCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTT
ACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATAC
ATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGT
TCATTATTGATAATGGAGGTATTGACACAGAAAAAGATTACCCCTACAAA
GCCATTGAT
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