CB290274

Overview
NameCB290274
Unique NameCB290274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2896 contig Csv1_Contig2896:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEF5 (Pyridoxamine kinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=pdxY PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.629e-29
Identity = 73/189 (38.62%), Postives = 112/189 (59.26%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGNL 711
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL  QQ+ +L+EG+ A   L     +L+GY+GS +    IL  V +++++NP  +Y+CDPVMG   K   VP+E+     ++ V +A  L PNQ E +   G +  S  D     + L   GP  V++  ++  G L
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRVGVNVWPLNTVQFSNHTQYGQWAGEVLAPQQIPELVEGIAAIGELGNCDAVLSGYLGSAAQGRAILSGVARIKAVNPKALYLCDPVMGHPEKGCSVPAEVSDFLLDEAVAMADFLCPNQLELDSFCGRKPQSLFDCLGMARSLLDKGPRAVLVKHLDYPGKL 192          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEA7 (Pyridoxamine kinase OS=Pseudomonas aeruginosa (strain PA7) GN=pdxY PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.433e-29
Identity = 74/187 (39.57%), Postives = 108/187 (57.75%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + GQVL  +Q+  L+EG+     L     +L+GY+GS +    IL+VV +++  NP  +Y+CDPVMG   K   V  E+     E+   VA  L PNQ E +     +  S AD  E  + L A GP  +++  +N  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFSNHTQYGRWTGQVLPPEQIPALVEGIAGIGELGNCDAVLSGYLGSAAQGRAILEVVGRIKQANPRALYLCDPVMGHPEKGCIVAPEVSDFLLEEAAAVADYLCPNQLELDSFCDRQPNSLADCVEMARSLLARGPRAILVKHLNYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSESM (Pyridoxamine kinase OS=Pseudomonas syringae pv. tomato GN=pdxY PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.856e-29
Identity = 72/187 (38.50%), Postives = 109/187 (58.29%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL  QQ+  LI+G+ A   L     +L+GY+GS +    IL  V ++++ NP  +Y+CDPVMG   K   VP ++     E+   VA  + PNQ E +  +G +  S  D     + L A GP  +V+  ++  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRIGVNVWPLNTVQFSNHTQYKQWTGEVLAPQQIPALIDGIAAIGELGNCDAVLSGYLGSAAQGRAILSGVARIKAANPKALYLCDPVMGHPEKGCIVPPQVSDFLLEEAAAVADFMCPNQLELDSFSGRKPESLPDCLAMARALLARGPKAIVVKHLDYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEAE (Pyridoxamine kinase OS=Pseudomonas aeruginosa GN=pdxY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.988e-29
Identity = 73/187 (39.04%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + GQVL  +Q+  L++G+     L     +L+GY+GS +    IL VV +++  NP  +Y+CDPVMG   K   V  E+     E+   VA  L PNQ E +     +  S AD  E  + L A GP  +++  +N  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFSNHTQYGRWTGQVLPPEQIPALVDGIAGIGELGNCDAVLSGYLGSAAQGRAILDVVARIKQANPRALYLCDPVMGHPEKGCIVAPEVSDFLLEEAAAVADYLCPNQLELDSFCDRQPNSLADCVEMARSLLARGPRAILVKHLNYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEAB (Pyridoxamine kinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=pdxY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.988e-29
Identity = 73/187 (39.04%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + GQVL  +Q+  L++G+     L     +L+GY+GS +    IL VV +++  NP  +Y+CDPVMG   K   V  E+     E+   VA  L PNQ E +     +  S AD  E  + L A GP  +++  +N  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFSNHTQYGQWTGQVLPPEQIPALVDGIAGIGELGNCDAVLSGYLGSAAQGRAILDVVARIKQANPRALYLCDPVMGHPEKGCIVAPEVSDFLLEEAAAVADYLCPNQLELDSFCDRQPNSLADCVEMARSLLARGPRAILVKHLNYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEA8 (Pyridoxamine kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=pdxY PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.988e-29
Identity = 73/187 (39.04%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + GQVL  +Q+  L++G+     L     +L+GY+GS +    IL VV +++  NP  +Y+CDPVMG   K   V  E+     E+   VA  L PNQ E +     +  S AD  E  + L A GP  +++  +N  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNAAAVFPMQRIGINVWPLNTVQFSNHTQYGRWTGQVLPPEQIPALVDGIAGIGELGNCDAVLSGYLGSAAQGRAILDVVARIKQANPRALYLCDPVMGHPEKGCIVAPEVSDFLLEEAAAVADYLCPNQLELDSFCDRQPNSLADCVEMARSLLARGPRAILVKHLNYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEPG (Pyridoxamine kinase OS=Pseudomonas putida (strain GB-1) GN=pdxY PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28
Identity = 73/187 (39.04%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL   Q+  L+EG+     L +   +L+GY+GS      IL  VE+++++NP  +Y+CDPVMG   K   VP E+ +   E+    A +L PNQ E +   G R  S  D     + L   GP  VV+  +   G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRIGVNVWPLNTVQFSNHTQYGQWAGEVLAPAQIPALVEGISNIGELGHCDAVLSGYLGSAEQGRAILAGVERIKAVNPKALYLCDPVMGHPEKGCIVPPEVSAFLLEEAAARADILCPNQLELDSFCGRRAQSLEDCVNMARSLLKRGPQVVVVKHLAYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSE14 (Pyridoxamine kinase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=pdxY PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28
Identity = 73/187 (39.04%), Postives = 109/187 (58.29%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL  QQ+  LIEG+ A   L     +L+GY+GS +    IL  V ++++ NP  +Y+CDPVMG   K   V  E+     ++   +A  + PNQ E +  +G +  S AD     + L A GP  VV+  ++  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRIGVNVWPLNTVQFSNHTQYKQWTGEVLAPQQIPALIEGIAAIGELGNCDAVLSGYLGSAAQGRAILTGVARIKAANPKALYLCDPVMGHPEKGCIVAPEVSDFLLQEAAAMADFMCPNQLELDSFSGRKPESLADCLAMARALLARGPKAVVVKHLDYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_VIBVY (Pyridoxamine kinase OS=Vibrio vulnificus (strain YJ016) GN=pdxY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.225e-28
Identity = 70/179 (39.11%), Postives = 103/179 (57.54%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPT-FKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 684
            +LSIQSH   G+ GN SAVFP+Q +G++V PIH+VQFSNHT Y   + G+  +   + +L+ GL     L     +LTGY GS      + + V K++  NP+ +YVCDPVMG  D+G +  P  +      +++P+A ++ PNQFE  Q     I +  D   AC+   A GP  V++
Sbjct:    4 ILSIQSHVAYGHAGNSSAVFPMQRMGFEVWPIHTVQFSNHTQYQEGWTGRAFSADDISELVRGLNNIGALEKCQAVLTGYQGSAEQCLAVEETVTKVKQANPDALYVCDPVMGAPDKGCIVAPG-IAENLLNRLMPMADVIVPNQFELSQFAEMEIHTLDDAIIACQRALAKGPKVVLV 181          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_VIBVU (Pyridoxamine kinase OS=Vibrio vulnificus GN=pdxY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.225e-28
Identity = 70/179 (39.11%), Postives = 103/179 (57.54%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPT-FKGQVLNGQQLCDLIEGLEANNLLYYTH-LLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 684
            +LSIQSH   G+ GN SAVFP+Q +G++V PIH+VQFSNHT Y   + G+  +   + +L+ GL     L     +LTGY GS      + + V K++  NP+ +YVCDPVMG  D+G +  P  +      +++P+A ++ PNQFE  Q     I +  D   AC+   A GP  V++
Sbjct:    4 ILSIQSHVAYGHAGNSSAVFPMQRMGFEVWPIHTVQFSNHTQYQEGWTGRAFSADDISELVRGLNNIGALEKCQAVLTGYQGSAEQCLAVEETVTKVKQANPDALYVCDPVMGAPDKGCIVAPG-IAENLLNRLMPMADVIVPNQFELSQFAEMEIHTLDDAIIACQRALAKGPKVVLV 181          
The following BLAST results are available for this feature:
BLAST of CB290274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PDXY_PSEF52.629e-2938.62Pyridoxamine kinase OS=Pseudomonas fluorescens (st... [more]
PDXY_PSEA73.433e-2939.57Pyridoxamine kinase OS=Pseudomonas aeruginosa (str... [more]
PDXY_PSESM5.856e-2938.50Pyridoxamine kinase OS=Pseudomonas syringae pv. to... [more]
PDXY_PSEAE9.988e-2939.04Pyridoxamine kinase OS=Pseudomonas aeruginosa GN=p... [more]
PDXY_PSEAB9.988e-2939.04Pyridoxamine kinase OS=Pseudomonas aeruginosa (str... [more]
PDXY_PSEA89.988e-2939.04Pyridoxamine kinase OS=Pseudomonas aeruginosa (str... [more]
PDXY_PSEPG1.305e-2839.04Pyridoxamine kinase OS=Pseudomonas putida (strain ... [more]
PDXY_PSE141.305e-2839.04Pyridoxamine kinase OS=Pseudomonas syringae pv. ph... [more]
PDXY_VIBVY2.225e-2839.11Pyridoxamine kinase OS=Vibrio vulnificus (strain Y... [more]
PDXY_VIBVU2.225e-2839.11Pyridoxamine kinase OS=Vibrio vulnificus GN=pdxY P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290274 ID=CB290274; Name=CB290274; organism=Citrus sinensis; type=EST; length=744bp
GCCCTTAGGAGTTGCCGTCCTTGTTTGGGCACTTCCCGAAACCTCACGTT
TTCCGGCTTGATAGCAGCTTCCGATTGGATTTGTAGGAGGAGAAGCTCGA
GCATATCAGGAATGGCGCCTCCGATTCTCTCATTGGCTTTACCTTCGGAG
ACTGGTCGAGTTTTGAGCATACAGTCGCATACTGTTCAGGGGTATGTTGG
AAATAAATCAGCTGTCTTTCCTCTCCAACTACTGGGCTATGACGTGGATC
CAATCCATTCAGTACAGTTCTCAAACCACACAGGATACCCAACTTTCAAG
GGCCAAGTTTTGAATGGACAACAATTATGCGACTTAATAGAAGGACTGGA
AGCCAATAATCTATTGTACTATACTCATTTATTAACAGGTTATATTGGTT
CTGTTTCTTTTCTGAACACGATACTGCAAGTTGTTGAAAAGCTTCGCTCT
ATAAACCCAAATCTGATATACGTTTGTGATCCAGTGATGGGTGACGAGGG
AAAGCTCTATGTTCCTTCCGAGCTAGTATCAGTATACCGTGAGAAGGTTG
TTCCAGTGGCCTCAATGTTGACCCCTAATCAGTTTGAAGCAGAACAGTTG
ACTGGTTTCAGGATTGGGAGTGAAGCAGATGGGAGGGAAGCTTGTAAGAT
TCTTCATGCTGCTGGACCTGCAAAGGTTGTGATCACAAGCATAAATATAG
ATGGCAATCTTTTCCTGATTGGCAGTCATCAGAAGGAAAAGGGT
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