CB290274

Overview
NameCB290274
Unique NameCB290274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2896 contig Csv1_Contig2896:1..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_VIBPA (Pyridoxamine kinase OS=Vibrio parahaemolyticus GN=pdxY PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.225e-28
Identity = 72/179 (40.22%), Postives = 102/179 (56.98%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPT-FKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 684
            +LSIQSH   G+ GN SAVFP+Q +G++V PIH+VQFSNHT Y   + G+    + + +L+ GL     L     +LTGY GS      +   V K++  NPN +YVCDPVMG  D+G +  P  +      +++P+A ++ PNQFE  Q     I S  D   AC+   A GP  V++
Sbjct:    4 ILSIQSHVSFGHAGNSSAVFPMQRMGFEVWPIHTVQFSNHTQYQEGWTGRAFAAEDISELVRGLGNIGALEKCQAVLTGYQGSAEQCLAVEDTVAKVKQANPNALYVCDPVMGAPDKGCIVAPG-IAENLLTRLMPMADVIVPNQFELSQFAEMEIHSLDDAITACQRALAKGPKVVLV 181          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEPW (Pyridoxamine kinase OS=Pseudomonas putida (strain W619) GN=pdxY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28
Identity = 72/187 (38.50%), Postives = 106/187 (56.68%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL   Q+  L+EG+     L +   +L+GY+GS      IL  VE+++++NP  +Y+CDPVMG   K   VP E+     +  V  A +L PNQ E +   G R  S  D     + L   GP  V++  +   G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRIGVNVWPLNTVQFSNHTQYGQWAGEVLAPAQIPALVEGISNIGELGHCDAVLSGYLGSAEQGRAILAGVERIKAVNPKALYLCDPVMGHAEKGCIVPQEVSEFLLDDAVAQADILCPNQLELDSFCGRRAQSLEDCVRMARGLLERGPQVVLVKHLAYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEE4 (Pyridoxamine kinase OS=Pseudomonas entomophila (strain L48) GN=pdxY PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28
Identity = 73/187 (39.04%), Postives = 107/187 (57.22%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL   Q+  L+EG+     L     +L+GY+GS      IL  V +++++NP  +Y+CDPVMG   K   VP+E+     E+ V  A +L PNQ E +   G R  S  D     + L   GP  V++  +N  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRVGVNVWPLNTVQFSNHTQYGQWAGEVLAPAQIPALVEGISNIGELGNCDAVLSGYLGSAEQGRAILAGVARIKAVNPKALYLCDPVMGHAEKGCIVPAEVSEFLLEEAVAKADILCPNQLELDSFCGRRAESLEDCVGMARGLLERGPRIVLVKHLNYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEPK (Pyridoxamine kinase OS=Pseudomonas putida (strain KT2440) GN=pdxY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 70/187 (37.43%), Postives = 105/187 (56.15%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +  P+++VQFSNHT Y  + G+VL   Q+  L+EG+     L +   +L+GY+GS      IL  VE+++++NP  +Y+CDPVMG   K   VP E+     ++    A +L PNQ E +   G R  S  D     + L   GP  V++  +   G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRIGVNAWPLNTVQFSNHTQYGQWAGEVLAPAQIPALVEGISNIGELGHCDAVLSGYLGSAEQGRAILAGVERIKAVNPKALYLCDPVMGHPEKGCIVPPEVSEFLLDEAAATADILCPNQLELDSFCGRRAQSLEDCVNMARSLLQRGPQVVLVKHLAYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEP1 (Pyridoxamine kinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=pdxY PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 70/187 (37.43%), Postives = 105/187 (56.15%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +  P+++VQFSNHT Y  + G+VL   Q+  L+EG+     L +   +L+GY+GS      IL  VE+++++NP  +Y+CDPVMG   K   VP E+     ++    A +L PNQ E +   G R  S  D     + L   GP  V++  +   G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRIGVNAWPLNTVQFSNHTQYGQWAGEVLAPAQIPALVEGISNIGELGHCDAVLSGYLGSAEQGRAILAGVERIKAVNPKALYLCDPVMGHPEKGCIVPPEVSEFLLDEAAATADILCPNQLELDSFCGRRAQSLEDCVNMARSLLQRGPQVVLVKHLAYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_PSEU2 (Pyridoxamine kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=pdxY PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.884e-27
Identity = 70/187 (37.43%), Postives = 108/187 (57.75%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEA-NNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGK-LYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            T  +L+IQSH V G+ GN +AVFP+Q +G +V P+++VQFSNHT Y  + G+VL  QQ+  LI+G+ A   L     +L+GY+GS +    IL  V ++++ NP  +Y+CDPVMG   K   V  E+     ++   +A  + PNQ E +  +G +  S  D     + L A GP  +V+  ++  G
Sbjct:    4 TPHLLAIQSHVVFGHAGNSAAVFPMQRIGVNVWPLNTVQFSNHTQYKQWTGEVLAPQQIPALIDGIAAIGELGNCDAVLSGYLGSAAQGRAILTGVARIKAANPKALYLCDPVMGHPEKGCIVAPEVSDFLLQEAAAMADFMCPNQLELDSFSGRKPESLHDCLAMARALLARGPRAIVVKHLDYPG 190          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_VIBHB (Pyridoxamine kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=pdxY PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27
Identity = 69/179 (38.55%), Postives = 101/179 (56.42%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPT-FKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVI 684
            +LSIQSH   G+ GN SAVFP+Q +G++V PIH+VQFSNHT +   + G+  +   + +L+ GL     L     +LTGY GS      +   V K++  NP  +YVCDPVMG  D+G +  P  +      +++P+A ++ PNQFE  Q     I +  D   AC+   A GP  V++
Sbjct:    4 ILSIQSHVSFGHAGNSSAVFPMQRMGFEVWPIHTVQFSNHTQHQEGWTGRAFSADDISELVRGLGNIGALEKCQAVLTGYQGSAEQCLAVEDTVTKVKQANPEALYVCDPVMGAPDKGCIVAPG-IAENLLNRLMPMADVIVPNQFELSQFAEMEIHTLDDAINACQRALAKGPKVVLV 181          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_BURXL (Pyridoxamine kinase OS=Burkholderia xenovorans (strain LB400) GN=pdxY PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.595e-26
Identity = 68/187 (36.36%), Postives = 108/187 (57.75%), Query Frame = 1
Query:  151 TGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGLEANNLL-YYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMGDEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDGN 708
            T  VLSIQSH V G+ GN +AVFP++ LG +V P+++VQFSNHT Y  + G  ++  Q+ +L++G+ A  +L     +L+GY+G+     ++L++V+ +++ NP   Y CDPVMG      V   +       +  VA  + PN  E ++L G  I +  +   AC+ L A GP K+V+    +D N
Sbjct:    2 TKNVLSIQSHVVFGHAGNSAAVFPMRRLGVNVWPLNTVQFSNHTQYGHWTGGAIDATQMVELVDGIGAIGMLPRCDAVLSGYLGTPEQAQSVLEIVKAVKAANPRAWYFCDPVMGAVSGCKVEPGIQEFLVRTMPGVADAMAPNHTELQRLVGREIETLEEAVTACRELIARGP-KLVLVKHLLDRN 187          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_YERPS (Pyridoxamine kinase OS=Yersinia pseudotuberculosis GN=pdxY PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26
Identity = 66/185 (35.68%), Postives = 109/185 (58.92%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            +LSIQSH V G+ GN +A FP++ +G +V P+++VQFSNHT Y  + G V+    L D+++G+ + + L     +L+GYIGS    + IL  V +++  NP+  Y CDPVMG  ++G +  P  +   +  + +P + M+ PN  E EQL+G R+ +     +  + L A GP  V++  ++  G
Sbjct:    4 ILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAVLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPG-VAEFFCNEALPASDMIAPNLLELEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAG 187          
BLAST of CB290274 vs. ExPASy Swiss-Prot
Match: PDXY_YERPN (Pyridoxamine kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=pdxY PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26
Identity = 66/185 (35.68%), Postives = 109/185 (58.92%), Query Frame = 1
Query:  160 VLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPIHSVQFSNHTGYPTFKGQVLNGQQLCDLIEGL-EANNLLYYTHLLTGYIGSVSFLNTILQVVEKLRSINPNLIYVCDPVMG--DEGKLYVPSELVSVYREKVVPVASMLTPNQFEAEQLTGFRIGSEADGREACKILHAAGPAKVVITSINIDG 705
            +LSIQSH V G+ GN +A FP++ +G +V P+++VQFSNHT Y  + G V+    L D+++G+ + + L     +L+GYIGS    + IL  V +++  NP+  Y CDPVMG  ++G +  P  +   +  + +P + M+ PN  E EQL+G R+ +     +  + L A GP  V++  ++  G
Sbjct:    4 ILSIQSHVVFGHAGNSAAEFPMRRMGVNVWPLNTVQFSNHTQYGHWTGCVMPASHLTDIVQGIADIDRLKDCDAVLSGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPG-VAEFFCNEALPASDMIAPNLLELEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAG 187          
The following BLAST results are available for this feature:
BLAST of CB290274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
PDXY_VIBPA2.225e-2840.22Pyridoxamine kinase OS=Vibrio parahaemolyticus GN=... [more]
PDXY_PSEPW4.957e-2838.50Pyridoxamine kinase OS=Pseudomonas putida (strain ... [more]
PDXY_PSEE44.957e-2839.04Pyridoxamine kinase OS=Pseudomonas entomophila (st... [more]
PDXY_PSEPK1.104e-2737.43Pyridoxamine kinase OS=Pseudomonas putida (strain ... [more]
PDXY_PSEP11.104e-2737.43Pyridoxamine kinase OS=Pseudomonas putida (strain ... [more]
PDXY_PSEU21.884e-2737.43Pyridoxamine kinase OS=Pseudomonas syringae pv. sy... [more]
PDXY_VIBHB4.197e-2738.55Pyridoxamine kinase OS=Vibrio harveyi (strain ATCC... [more]
PDXY_BURXL1.595e-2636.36Pyridoxamine kinase OS=Burkholderia xenovorans (st... [more]
PDXY_YERPS2.083e-2635.68Pyridoxamine kinase OS=Yersinia pseudotuberculosis... [more]
PDXY_YERPN2.083e-2635.68Pyridoxamine kinase OS=Yersinia pestis bv. Antiqua... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290274 ID=CB290274; Name=CB290274; organism=Citrus sinensis; type=EST; length=744bp
GCCCTTAGGAGTTGCCGTCCTTGTTTGGGCACTTCCCGAAACCTCACGTT
TTCCGGCTTGATAGCAGCTTCCGATTGGATTTGTAGGAGGAGAAGCTCGA
GCATATCAGGAATGGCGCCTCCGATTCTCTCATTGGCTTTACCTTCGGAG
ACTGGTCGAGTTTTGAGCATACAGTCGCATACTGTTCAGGGGTATGTTGG
AAATAAATCAGCTGTCTTTCCTCTCCAACTACTGGGCTATGACGTGGATC
CAATCCATTCAGTACAGTTCTCAAACCACACAGGATACCCAACTTTCAAG
GGCCAAGTTTTGAATGGACAACAATTATGCGACTTAATAGAAGGACTGGA
AGCCAATAATCTATTGTACTATACTCATTTATTAACAGGTTATATTGGTT
CTGTTTCTTTTCTGAACACGATACTGCAAGTTGTTGAAAAGCTTCGCTCT
ATAAACCCAAATCTGATATACGTTTGTGATCCAGTGATGGGTGACGAGGG
AAAGCTCTATGTTCCTTCCGAGCTAGTATCAGTATACCGTGAGAAGGTTG
TTCCAGTGGCCTCAATGTTGACCCCTAATCAGTTTGAAGCAGAACAGTTG
ACTGGTTTCAGGATTGGGAGTGAAGCAGATGGGAGGGAAGCTTGTAAGAT
TCTTCATGCTGCTGGACCTGCAAAGGTTGTGATCACAAGCATAAATATAG
ATGGCAATCTTTTCCTGATTGGCAGTCATCAGAAGGAAAAGGGT
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