CB290278

Overview
NameCB290278
Unique NameCB290278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig365 contig Csv1_Contig365:298..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.966e-46
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1
Query:  175 PWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            P  IS A G  LL  P  NKG AF+ +ER +  L GLLP A  + Q Q  +     R +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:    7 PLYISYA-GPALLSTPLLNKGSAFSAEERASFNLEGLLPEATETIQEQVVRAYQQYRGFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYANRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLADPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.966e-46
Identity = 91/196 (46.43%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+E+ER    L GLLP AV + + Q ++       ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   16 AGPILLEFPLLNKGSAFSEEERSTFNLHGLLPEAVETIEEQVERAYRQYLDFKNDNDKHIYLRNIQDTNETLFYRLLESHLTEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNRANIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.966e-46
Identity = 88/196 (44.90%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+++ER +  L GLLPP   S   Q ++       ++  + K++ +  + + NE LF+KL+ +N+ E++P++YTPTVG+AC+++  I+R  +GL+IS +++  I ++L+N  +  ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT +++LL D  Y+
Sbjct:   13 AGPSLLETPLLNKGSAFSKEERGSFNLTGLLPPRFESIDEQAERAFRQYSCFQTNINKHIYLRAIHDNNETLFFKLVQNNLAEMMPIIYTPTVGDACEQFSDIYRSSRGLFISYEDRFNIDDMLRNATKNKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAHTLPVMLDVGTNNQKLLDDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_BDEBA (NAD-dependent malic enzyme OS=Bdellovibrio bacteriovorus GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.567e-46
Identity = 90/196 (45.92%), Postives = 135/196 (68.88%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            SG  LL     NKG AF+E+ER    L GL+P  + + + Q +++ +  R  +  + K+V +  L++ NE LFY L+++++ E++P++YTP VGEAC+ +  I+R  +GL+IS   K +I E+L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++ LL D  Y+
Sbjct:   16 SGTVLLEMSLLNKGSAFSEEERTHLNLHGLVPQTIETIEEQAERVYSQYRLLKADIDKHVYLRNLQDTNETLFYHLVVNHLTEMMPIIYTPVVGEACEHFSEIYRASRGLFISYPNKDRIDEMLRNVTKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQALLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.353e-46
Identity = 88/196 (44.90%), Postives = 133/196 (67.86%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  L+  P  NKG AF+ +ER +  L GLLP    + Q Q ++     + +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGT + Q L D  Y+
Sbjct:   13 AGPALMATPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNPQRLADPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_SHEFN (NAD-dependent malic enzyme OS=Shewanella frigidimarina (strain NCIMB 400) GN=sfcA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.379e-46
Identity = 88/196 (44.90%), Postives = 132/196 (67.35%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  +L  P  NKG AF+E+ER    L GL+P  + +   Q  +     + +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N     ++VIVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P+ CL +T+DVGT + QLL+D  Y+
Sbjct:   13 AGPAILESPLLNKGSAFSEEERIYFNLEGLIPWVIETIDEQAARAYAQFKNFTNDLDKHIYLRNIQDTNETLFYRLVRNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRHKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYCLAVTLDVGTDNPQLLEDPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.379e-46
Identity = 88/196 (44.90%), Postives = 136/196 (69.39%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+E+ER+   L GLLP A+ + + Q ++       +    ++++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+I+   + +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   16 AGPILLEFPLLNKGSAFSEEERNTFNLNGLLPEAIETIEEQVERAYRQFCDFHSATEQHIYLRNIQDTNETLFYRLLRSHLSEMMPIIYTPTVGEACEHFSYIYRRARGLFIAYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.720e-46
Identity = 88/196 (44.90%), Postives = 133/196 (67.86%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER +  L GLLP    + Q Q ++     + +E  + K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LPI +DVGT + Q L D  Y+
Sbjct:   13 AGPALLATPLLNKGSAFSGEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLYYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTNNPQRLADPMYM 208          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_YERPY (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=sfcA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.470e-46
Identity = 91/196 (46.43%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AFT  ER+   L GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYM 211          
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_YERPS (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis GN=sfcA PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.470e-46
Identity = 91/196 (46.43%), Postives = 134/196 (68.37%), Query Frame = 1
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AFT  ER+   L GLLP AV + + Q ++     + ++    K++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLNDPLYM 211          
The following BLAST results are available for this feature:
BLAST of CB290278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_VIBC31.966e-4646.31NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAO1_PROMH1.966e-4646.43NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MAO1_COLP31.966e-4644.90NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAO1_BDEBA2.567e-4645.92NAD-dependent malic enzyme OS=Bdellovibrio bacteri... [more]
MAO1_VIBPA3.353e-4644.90NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_SHEFN4.379e-4644.90NAD-dependent malic enzyme OS=Shewanella frigidima... [more]
MAO1_EDWI94.379e-4644.90NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]
MAO1_VIBHB5.720e-4644.90NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAO1_YERPY7.470e-4646.43NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPS7.470e-4646.43NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290278 ID=CB290278; Name=CB290278; organism=Citrus sinensis; type=EST; length=783bp
GCCCTTGGGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGCCAATGGA
GAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACT
CGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGT
GTCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGG
GTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTG
AGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTT
ATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATA
TGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAA
ATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTC
CCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAG
TATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAA
AGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATT
GTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCA
GGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAG
GCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAAA
CATGAGCAATTGTTGAAGGATGAATTCTACATT
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