CB290278

Overview
NameCB290278
Unique NameCB290278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig365 contig Csv1_Contig365:298..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO81 (NAD-dependent malic enzyme OS=Escherichia coli O81 (strain ED1a) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO7I (NAD-dependent malic enzyme OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO5E (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO45 (NAD-dependent malic enzyme OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO27 (NAD-dependent malic enzyme OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 138/196 (70.41%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP  V + + Q ++     + ++  + K++ +  +++ NE LFY+L+ ++++E++PV+YTPTVG AC+++  I+RR +G++IS + +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT ++QLL D  Y+
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYM 211
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.505e-46
Identity = 89/196 (45.41%), Postives = 136/196 (69.39%), Query Frame = 1 
Query:  196 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            +G  LL  P  NKG AF+ +ER    L GLLP A+ S + Q ++     ++++  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N   ++++VIVVTDGERILGLGD G  GMGIP+GKLALYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:   13 AGPALLETPLLNKGSAFSIEERMFFNLEGLLPEAIESIEEQTERAYQQYQKFDKDMDKHIYLRNIQDTNETLFYRLVENHITEMMPIIYTPTVGAACEDFSNIYRRGRGLFISYPNRDRIEDMLNNASRQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYTLPVVLDVGTNNPQRLSDPMYM 208
[Close]
BLAST of CB290278 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.966e-46
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 1 
Query:  175 PWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRPSACLPITVDVGTKHEQLLKDEFYI 783
            P  IS A G  LL  P  NKG AF+ +ER +  L GLLP A  + Q Q  +     R +E  + K++ +  +++ NE LFY+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+  LP+ +DVGT + Q L D  Y+
Sbjct:    7 PLYISYA-GPALLSTPLLNKGSAFSAEERASFNLEGLLPEATETIQEQVVRAYQQYRGFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYANRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNPQRLADPMYM 208
The following BLAST results are available for this feature:
BLAST of CB290278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECO811.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli O81... [more]
MAO1_ECO7I1.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli O7:... [more]
MAO1_ECO5E1.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO571.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO551.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO451.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli O45... [more]
MAO1_ECO271.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli O12... [more]
MAO1_ECO241.505e-4645.41NAD-dependent malic enzyme OS=Escherichia coli O13... [more]
MAO11_PHOPR1.505e-4645.41NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_VIBCH1.966e-4646.31NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290278 ID=CB290278; Name=CB290278; organism=Citrus sinensis; type=EST; length=783bp
GCCCTTGGGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGCCAATGGA
GAGCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACT
CGAAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGT
GTCACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGG
GTACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTG
AGAAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTT
ATAAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATA
TGAAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAA
ATGAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTC
CCAGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAG
TATCTTCAGGCGTCCTCAGGGTCTATACATAAGTCTGAAAGAGAAGGGAA
AGATTCTTGAGGTTTTGAAGAACTGGCCTGAAAGGAGTATTCAGGTTATT
GTTGTCACAGATGGTGAGCGCATTTTGGGACTTGGGGATCTTGGCTGTCA
GGGGATGGGAATTCCTGTTGGGAAATTGGCTTTGTACACAGCACTTGGAG
GCATTCGTCCCTCAGCATGTTTGCCCATAACCGTTGATGTGGGTACAAAA
CATGAGCAATTGTTGAAGGATGAATTCTACATT
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