CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.285e-25 Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = -2 Query: 363 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKS 854 +S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ + ++F W +E QASPS + GNK D+ + R+V ++A+A+ A ++ + ETSAK +NV + F IAK KS Sbjct: 28 ESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPS----IVIALAGNKADL--ASKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKS 184
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.285e-25 Identity = 69/197 (35.03%), Postives = 107/197 (54.31%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA--------KNALKSGEEEEIYLPDTIDVGNSSQPRSSGC 854 DSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ETSAK NVE+AF +A A GE + + T +P GC Sbjct: 16 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKIDST-----PVKPAGGGC 200
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.285e-25 Identity = 63/163 (38.65%), Postives = 98/163 (60.12%), Query Frame = -2 Query: 366 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 854 DSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ETSAK NVE+AF +A K Sbjct: 16 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEIKK 171
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.678e-25 Identity = 68/183 (37.16%), Postives = 105/183 (57.38%), Query Frame = -2 Query: 315 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK---SGEEEEIYLPDTIDVGN 854 DSGVGK+ L+ ++ F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +L+YDV KSFDN+ W AS +N +++GNK D + + R VS ++ +A A + + + E SAK +NV+EAF +A+ K E E + +D+GN Sbjct: 17 DSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHAS----ENVYKILIGNKCDCE--DQRQVSFEQGQA-LADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNVDLGN 192
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.678e-25 Identity = 68/183 (37.16%), Postives = 105/183 (57.38%), Query Frame = -2 Query: 309 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTID-VGNSS 854 DS VGK+ L+ ++ +F+ KATIG +F T+ + + R QIWDTAGQER++++ A+YRGA +LVYD+ +SFD++ W EE A N +++GNK D+ G RVV + A+ + A + N+ + ETSA E NVE AF + + ++ + + +D GNSS Sbjct: 26 DSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHAD----KNIVIMLIGNKSDL--GTLRVVPTEDAKEF-AERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSS 201
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RABL_DICDI (Ras-related protein RabL OS=Dictyostelium discoideum GN=rabL PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.678e-25 Identity = 63/169 (37.28%), Postives = 94/169 (55.62%), Query Frame = -2 Query: 366 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCAS------KGNIPYFETSAKEGINVEEAFQCIAKNALK 854 DS VGKTSL YVN ++ +IG D+ KE++ E++ L +WDT GQERFQ+ ++RGA+C L +D+++ +SF NL W +E + N PFV++G K D+ + +S+ + WC + + YFETSAK NV E + AK AL+ Sbjct: 15 DSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWDTCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCY----GNIPFVLVGTKSDIP-RTDKSISKARIEQWCKNIEDQGIIDKVHYFETSAKLSQNVTELYNVAAKLALE 178
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 1.678e-25 Identity = 63/163 (38.65%), Postives = 98/163 (60.12%), Query Frame = -2 Query: 366 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 854 DSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV SF+N+ W +E AS +N +++GNK D+ +VV A+ + S G IP+ ETSAK NVE++F +A K Sbjct: 19 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYAS----ENVNKLLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKK 174
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.678e-25 Identity = 62/158 (39.24%), Postives = 97/158 (61.39%), Query Frame = -2 Query: 381 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA 854 DSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W +E AS +N +++GNK D+ +VV A+ + G IP+ ETSAK NVE+AF +A Sbjct: 19 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDFTTAKEYADQLG-IPFLETSAKNATNVEQAFMTMA 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.192e-25 Identity = 72/201 (35.82%), Postives = 113/201 (56.22%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQ--------CIAKNALKSGE-EEEIYLP---DTIDVGNSSQPRSSGC 854 DSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQER++++ A+YRGA +L YD+ ++FDN+ W E N ++ GNK D+ + R VSE+ +A +G + + ETSA E +NV++AFQ I+K AL + E LP TI+V ++S GC Sbjct: 20 DSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLREL----RDHRDSNIVIILAGNKSDLK--HLRAVSEQDDQALVKKEG-LSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQEAAASTALPGQGTTINVSDNSANVKRGC 213
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.192e-25 Identity = 71/194 (36.60%), Postives = 111/194 (57.22%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA----KNALKSGEEEEIYLPDTIDV-GNSSQPRSSGC 854 DS VGK+ L+ ++ + + + Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYD M+SF+N+ W E A+ ++ +++GNK D+ S+VVS + RA A + IP+ ETSAK+ INVE+AF IA K + P T+ + G Q + GC Sbjct: 16 DSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYAN----ESVCKLLIGNKNDM--VESKVVSTETGRA-LADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGC 202 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |