CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.192e-25 Identity = 62/163 (38.04%), Postives = 98/163 (60.12%), Query Frame = -2 Query: 366 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 854 DSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +S+ N+ W +E AS +N +++GNK D+ +VV A+ + S G +P+ ETSAK NVE+AF +A K Sbjct: 16 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVGNKSDLT--TKKVVDNTTAKEFADSLG-VPFLETSAKNATNVEQAFMTMAAEIKK 171
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25 Identity = 64/163 (39.26%), Postives = 97/163 (59.51%), Query Frame = -2 Query: 366 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALK 854 DSGVGK+ L+ ++ + ++ Y +TIG DF + ++ + + LQIWDTAGQERF+++ ++YRGA ++VYDV +SF+N+ W E A +N +++GNK D+ RVVS A+ + S G I + ETSAK NVE+AF +A K Sbjct: 16 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYAC----ENVNKLLVGNKSDLTA--KRVVSTDAAKEFAESLG-IEFLETSAKNAANVEKAFMMMAAQIKK 171
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25 Identity = 73/197 (37.06%), Postives = 111/197 (56.35%), Query Frame = -2 Query: 285 SGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK---NALKSGEEEEIYLPDTIDVGNSS-----QPRSSGCE 851 +G GK+ L++Q++ KF TIG +F ++ V + LQIWDTAGQERF+S+ ++YRGA +LVYD+ S ++++ L NW + ASP N ++ GNK D+D R V+ +A + A + + + ETSA G NVEEAF A+ N ++SGE + + I G++S QPR S + Sbjct: 17 AGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASP----NIVIILCGNKKDLDA--DREVTFLEASRF-AQENELMFLETSALTGENVEEAFLKCARSIPNKIESGELDPERMGSGIQYGDASLRQIRQPRGSAAQ 206
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25 Identity = 69/194 (35.57%), Postives = 112/194 (57.73%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEEIYLPDTIDVGNSS--QPRSSGC 854 DSGVGK+ L+ ++ + +S + +TIG DF + ++ + LQIWDTAGQERF+++ ++YRGA ++VYDV +F+N+ W +E A +N +++GNK D+ +VV A+A+ A IP+ ETSAK+ NVE+AF +A KN L + + + + + G+S+ P+S C Sbjct: 16 DSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFAC----ENVNKLLVGNKSDLVA--KKVVDFNTAKAF-ADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPKSGCC 202
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25 Identity = 62/157 (39.49%), Postives = 97/157 (61.78%), Query Frame = -2 Query: 384 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 854 DSGVGK+++++++ +F + K+TIG +F T+ Q E + QIWDTAGQER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK D++ + R V+E+ ++ A K + + ETSA E NVE+AFQ I Sbjct: 20 DSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHAD----SNIVIMMAGNKSDLN--HLRSVAEEDGQS-LAEKEGLSFLETSALEATNVEKAFQTI 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: YPT5_SCHPO (GTP-binding protein ypt5 OS=Schizosaccharomyces pombe GN=ypt5 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25 Identity = 64/160 (40.00%), Postives = 97/160 (60.62%), Query Frame = -2 Query: 378 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFT-LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 854 DS VGK+SL+ ++V +F + ++TIGA FLT+ + ++ L+IWDTAGQER++SL +YR A+C ++VYD+ S + +W +E QA P+ + GNK+D+ R V + A A+ A++ N+ +FETSAK NV E F IAK Sbjct: 22 DSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQA----PEGIVIALAGNKLDL-AQERRAVEKADAEAY-AAEANLLFFETSAKTAENVNELFTAIAK 175
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB32A_DICDI (Ras-related protein Rab-32A OS=Dictyostelium discoideum GN=rab32A PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25 Identity = 66/196 (33.67%), Postives = 109/196 (55.61%), Query Frame = -2 Query: 282 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL-FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQAS-PSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTI---DVGNSSQPRSSGCEC 854 D G GKTS++ ++V+ FS YK+TIG DF K + ++ + LQ+WD AGQERF S+ +Y+ A ++ +DV M +F+ + W+ + + + +D P V+L NK D+ G ++ + + +C G I +FETSAKE +N+E+A + + + LK+ + TI D+ QP S+G C Sbjct: 23 DIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDIAGQERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLLANKCDL-GKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKNDVRRNQPIEGTIQPGDLNKQPQPTSTGPSC 217
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25 Identity = 61/157 (38.85%), Postives = 98/157 (62.42%), Query Frame = -2 Query: 384 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 854 DSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K + + ETSA + NVE AFQ I Sbjct: 19 DSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAFQTI 168
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25 Identity = 61/157 (38.85%), Postives = 98/157 (62.42%), Query Frame = -2 Query: 384 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 854 DSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K + + ETSA + NVE AFQ I Sbjct: 19 DSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAFQTI 168
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25 Identity = 61/157 (38.85%), Postives = 98/157 (62.42%), Query Frame = -2 Query: 384 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCI 854 DSGVGK++L++++ +F+ + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +++N+ W +E A N +++GNK D+ + R V +ARA+ A K + + ETSA + NVE AFQ I Sbjct: 19 DSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDL--RHLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAFQTI 168 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |