CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24 Identity = 66/195 (33.85%), Postives = 106/195 (54.36%), Query Frame = -2 Query: 282 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV--GNSSQPRSS--GCEC 854 + VGKTSL+ +++ F N Y+ATIG DFL+K + EDR LQ+WDTAGQERF+SL ++ R + V+VYD+ ++ SF + W ++ + + +++GNK D+ + E + R A + ++ + ETSAK G NV++ F+ +A +E ID+ +P +S GC C Sbjct: 21 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERG----SDVIIMLVGNKTDLADKRQITIEEGEQR---AKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC 208
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB6A_MOUSE (Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4) HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24 Identity = 66/195 (33.85%), Postives = 104/195 (53.33%), Query Frame = -2 Query: 282 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDV---GNSSQP-RSSGCEC 854 + VGKTSL+ +++ F N Y+ATIG DFL+K + EDR LQ+WDTAGQERF+SL ++ R + V+VYD+ ++ SF W ++ + + +++GNK D+ + E + + A + N+ + ETSAK G NV++ F+ +A ++ D ID+ QP GC C Sbjct: 21 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERG----SDVIIMLVGNKTDLADKRQVSIEEGERK---AKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVNEGGCSC 208
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24 Identity = 75/194 (38.66%), Postives = 104/194 (53.61%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK----NALKSGEEEEIYLPDTIDVGNSSQPRSSGC 854 DSGVGKT + Q+ + F S + AT+G D K V + LQIWDTAGQERF+S+ A+YR A +L+YD+ + SFDN+ W E A + ++LGNK DV + RV+ + G +P+ ETSAK G+NVE AF IAK A + +E + D ++ S + RSS C Sbjct: 37 DSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQ----RDVVIMLLGNKADV--SSERVIRSEDGETLAREYG-VPFMETSAKTGMNVELAFLAIAKELKYRAGRQPDEPSFQIRDYVE---SQKKRSSCC 220
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.423e-24 Identity = 62/175 (35.43%), Postives = 106/175 (60.57%), Query Frame = -2 Query: 354 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKSGEE 854 DSGVGK++L++++ +F+ + K+TIG +F TK + ++++ QIWDTAGQER++++ A+YRGA +LVYDV +++N+ W +E P N +++GNK D+ + VS +A+ A + + + ETSA E NVE AF + ++K A+++G+E Sbjct: 21 DSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDP----NIVVMLIGNKSDL--RHLVAVSTDEAKG-LAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDE 188
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.423e-24 Identity = 62/175 (35.43%), Postives = 105/175 (60.00%), Query Frame = -2 Query: 354 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKSGEE 854 DSGVGK++L++++ +FS + K+TIG +F T+ +Q + ++ QIWDTAGQER++++ A+YRGA +LVYDV +F+N+ W +E P N +++GNK D+ + E KA A + ++ + ETSA E NVE AF + ++K ++++G++ Sbjct: 22 DSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDP----NIVVMLVGNKSDLRHLVAVQTDEGKA---FAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD 189
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB10_RAT (Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.423e-24 Identity = 68/182 (37.36%), Postives = 109/182 (59.89%), Query Frame = -2 Query: 309 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSS 854 DSGVGKT ++ ++ + F+ + +TI DF K V+ + + LQIWDTAGQERF ++ ++YRGA +LVYD+ + KSF+N++ W A+ ++ ++L NK D+D + RVV + K A + I +FETSAK IN+E+AF + ++ L+ +E P++ +V SS Sbjct: 17 DSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHAN----EDVERMLLRNKCDMD--HKRVVPKGKGEQ-IAREHRIRFFETSAKANINIEKAFLTLPEDILRKTPVKE---PNSENVDISS 188
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB38_MOUSE (Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.165e-24 Identity = 60/163 (36.81%), Postives = 98/163 (60.12%), Query Frame = -2 Query: 369 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNAL 854 D GVGKTS++ +YV++ FS+ Y+ATIG DF K + ++ + + LQ+WD AGQERF ++ +YR A +V+DV +F+ + W+ + + + + V+L NK D G + + + K +C G + +FETSAKE IN++EA +C+ K+ L Sbjct: 17 DLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLANKCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHIL 178
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 3.165e-24 Identity = 73/191 (38.22%), Postives = 103/191 (53.93%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN-ALKSGEEEEIYLPDTIDVGNSSQPRSSGC 854 D+GVGKT + Q+ + F S + AT+G DF K V + LQIWDTAGQERF+S+ A+YR A +L+YD+ + SFDN+ W E A + ++LGNK D+ + RV+ + G +P+ ETSAK G+NVE AF IAK ++G + + D S + RSS C Sbjct: 37 DTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ----RDVVIMLLGNKADM--SSERVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCC 220
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24 Identity = 59/182 (32.42%), Postives = 109/182 (59.89%), Query Frame = -2 Query: 309 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSS 854 DSGVGK++L++++ +F+ K+TIG +F T+ ++ + + QIWDTAGQER++++ A+YRGA ++VYD++ S++N N+W E A DN ++GNK D+ + R V ++++ + A + + + ETSA NV++AF+ + + + ++ L D+ GN++ Sbjct: 21 DSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENAD----DNVAVGLIGNKSDL--AHLRAVPTEESKTF-AQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNAN 195
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24 Identity = 66/194 (34.02%), Postives = 106/194 (54.64%), Query Frame = -2 Query: 282 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 854 DSGVGK+ L+ ++ + ++ Y +TIG DF + + E + LQIWDTAGQERF+++ ++YRGA ++VYDV SF+N+ W +E A + +++GNK D+ + +VV A+ + A NIP+ ETSAK+ NVE+AF ++ K + + ++ VG + S C Sbjct: 16 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA----VEGVNRLLVGNKSDM--VDKKVVEYSVAKEF-ADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGTNVSQSSSNC 202 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |