CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24 Identity = 70/197 (35.53%), Postives = 107/197 (54.31%), Query Frame = -2 Query: 291 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---------KNALKSGEEEEIYLPDTIDVGNSSQPRSSG 854 D VGKTS++ +++ KF Y+ TIG DFL+K + EDR LQ+WDTAGQERF+SL ++ R + ++VYDV++ ++F N + W E+ + S N V++GNK D+ +SE + + + + + ETSAKE N++ F+ IA A KS + ++ L T NSSQ G Sbjct: 17 DQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQS---NVIIVLVGNKTDLVEKRQVSISEGEDK---GKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLATKSDDMVDVNLKTT---SNSSQGEQQG 204
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB26_DROME (Ras-related protein Rab-26 OS=Drosophila melanogaster GN=Rab26 PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24 Identity = 65/168 (38.69%), Postives = 92/168 (54.76%), Query Frame = -2 Query: 354 DSGVGKTSLMNQYVNKKFS-NQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 854 DSGVGKTS + +Y +F + AT+G K V + LQIWDTAGQERF+S+ A+YR A +L+YDV + ++DN+ W E A ++ V++GNK D G +V E R + N+P+ ETSAK G+NVE +F +A+ G E Sbjct: 198 DSGVGKTSFLVKYNTGEFRLGSFSATVGIALTNKVVVVDGTRVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQ----EDVVIVLIGNKADCSGSERQVKREDGER--LGREHNVPFMETSAKTGLNVELSFTAVARQLKSRGYE 359
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24 Identity = 67/160 (41.88%), Postives = 92/160 (57.50%), Query Frame = -2 Query: 378 DSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 854 DSGVGKT L+ ++ + F + + +T+G DF K V + LQIWDTAGQERF+S+ A+YR A +L+YDV + SFD++ W E A D+ ++LGNK VD R V + A G +P+ ETSAK G+NV+ AF IAK Sbjct: 71 DSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQ----DDVVLMLLGNK--VDSAQERAVKREDAEKLAKDYG-LPFMETSAKTGLNVDLAFTAIAK 223
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24 Identity = 70/202 (34.65%), Postives = 107/202 (52.97%), Query Frame = -2 Query: 282 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDV--DGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA-KNALKSGEEEEIYLPD--------TIDVGNSSQPRSSGCEC 854 ++ VGK+S++ ++V+ F+ + TIGA FLT+ V + +IWDTAGQERF SL +YR A ++VYDV +SF +W +E QAS + ++GNKID+ +GG +V E+ + A + + +FETSAK G NV + F I K LK+ EE+ + ++ N +S C C Sbjct: 15 EAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQAS----KDIIIALVGNKIDMLQEGGERKVAREEGEK--LAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLKTAEEQNSASNERESNNQRVDLNAANDGTSANSACSC 210
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24 Identity = 61/154 (39.61%), Postives = 89/154 (57.79%), Query Frame = -2 Query: 393 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 854 D+GVGK+S++ ++V F TIGA F+TK VQ+++ L IWDTAGQERF++L +YRG+ ++VYD+ ++F L NW +E P N + GNK D+ + R V E+ A+ + S I + ETSAK IN+ E F Sbjct: 13 DTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKEL----RQHGPPNIVVAIAGNKCDLI--DVREVMERDAKDYADSIHAI-FVETSAKNAININELF 159
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RABQ_DICDI (Ras-related protein RabQ OS=Dictyostelium discoideum GN=rabQ PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24 Identity = 67/194 (34.54%), Postives = 108/194 (55.67%), Query Frame = -2 Query: 282 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYL----PDTIDVGNSSQ--PRSSGCEC 845 VGK+SL+ Q+ K+FS + TIG +F T+ + + L+IWDTAGQE F+S+ +YRGA +L YD+ +SF L+ W +E +SP N ++GNK D + RV++ ++ A A + +I +FETSAK+ +VE F ++K L ++ + + P +I +G +Q P+ EC Sbjct: 16 VGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTAGQESFRSITTNYYRGAHIALLCYDITKRQSFQYLSGWMDEVRQMSSP----NIVIALIGNKCDCK--DKRVITTEEG-AKNAKENDILFFETSAKDYESVESVFDGVSKKVLSLIKQGTLTVVNKKPQSIQLGAPTQETPKKPKSEC 202
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24 Identity = 71/204 (34.80%), Postives = 110/204 (53.92%), Query Frame = -2 Query: 294 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK-----------------NALKSGEEEEIYLPDTIDVGNSSQPRSS 854 D+GVGK+ L+ Q+ +K+F + TIG +F + V + + LQIWDTAGQE F+S+ ++YRGA +LVYD+ ++F++L +W E+ A N +++GNK D++ + R V ++ A+ G I + ETSAK NVEEAF AK N +K G ++ I + VG S+ R+S Sbjct: 14 DTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLED----ARQHSSSNMVIMLIGNKSDLE--SRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSI----STSVGPSASQRNS 206
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.051e-24 Identity = 62/174 (35.63%), Postives = 104/174 (59.77%), Query Frame = -2 Query: 357 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF--------QCIAKNALKSGE 854 DSGVGK++L++++ +F+ + K+TIG +F TK + + ++ QIWDTAGQER++++ A+YRGA +LVYDV +F+ W +E P N +++GNK D+ + VS + +A+ A K ++ + ETSA E NVE AF + ++K A+++G+ Sbjct: 21 DSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDP----NIVVMLIGNKSDL--RHLVTVSTEDGKAF-AEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGD 187
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 7.051e-24 Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = -2 Query: 354 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 854 DSGVGK+S++ ++ F+ Y +TIG DF K V E + LQIWDTAGQERF+ + YRG ++VYDV +SF+N+ W +E A DN +++GNK D+ + +VV A+ + A +I + ETSAK+ IN+E+AF + K + EE Sbjct: 16 DSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYAR----DNVIKMIIGNKSDMI--SQKVVDPFLAQEF-ADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEE 175
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB6_DICDI (Ras-related protein Rab-6 OS=Dictyostelium discoideum GN=rab6 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.051e-24 Identity = 66/195 (33.85%), Postives = 104/195 (53.33%), Query Frame = -2 Query: 291 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA-------KNALKSGEEEEIYLPDTIDVGNSSQPRSSG 854 D VGKTS++ +++ F Y+ATIG DFL+K + EDR LQ+WDTAGQERF+SL ++ R + ++VYD+ + SF N W E+ + +N +++GNK D+ + E +A+ A + +I + ETSAK G N++ F+ +A N++ + E I D D G + G Sbjct: 14 DQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERG----NNVVIMLVGNKTDLADKRQVSIEEGEAK---AKEYDIMFTETSAKAGFNIKALFRKVASALPGIDSNSMTKNQHEIISEVDITDGGKPALKEGDG 201 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |