CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RRAS_MOUSE (Ras-related protein R-Ras OS=Mus musculus GN=Rras PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17 Identity = 63/189 (33.33%), Postives = 101/189 (53.44%), Query Frame = -2 Query: 282 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 848 GVGK++L Q++ F + Y TI D TK + L I DTAGQE F ++ + R + +LV+ +N +SF+ + + L D D+FP V++GNK D++ N R V +A ++ AS ++ YFE SAK +NV+EAF+ + + K E+E LP + ++ + + GC C Sbjct: 39 GVGKSALTIQFIQSYFVSDYDPTI-EDSYTKICTVDGIPARLDILDTAGQEEFGAMREQYMRAGNGFLLVFAINDRQSFNEVGKLFTQIL---RVKDRDDFPIVLVGNKADLE--NQRQVLRSEASSFSASH-HMTYFEASAKLRLNVDEAFEQLVRAVRKYQEQE---LPPS--PPSAPRKKDGGCPC 215
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB33B_MOUSE (Ras-related protein Rab-33B OS=Mus musculus GN=Rab33b PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17 Identity = 61/168 (36.31%), Postives = 89/168 (52.98%), Query Frame = -2 Query: 363 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERF-QSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAK---EGINVEEAFQCIAKNALKS 854 DS VGKT L ++ +F ++ +ATIG DF + V + +Q+WDTAGQERF +S+ +YR V VYD+ +M SF +L W EE +D P +++GNK D+ S + A ++P FETSAK + +VE F +A + LKS Sbjct: 41 DSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAND---IPRILVGNKCDL---RSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA-HKLKS 201
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB33B_CHICK (Ras-related protein Rab-33B OS=Gallus gallus GN=RAB33B PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17 Identity = 62/168 (36.90%), Postives = 93/168 (55.36%), Query Frame = -2 Query: 363 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERF-QSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAK---EGINVEEAFQCIAKNALKS 854 DS VGKT L ++ +F + +ATIG DF + V + +Q+WDTAGQERF +S+ +YR V VYD+ ++ SF +L +W EE +D P +++GNK D+ N+ V A+ + A ++P FETSAK + +VE F +A + LKS Sbjct: 39 DSNVGKTCLTYRFCAGRFPQRTEATIGVDFRERAVTIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNLASFHSLPSWIEECKQHLLTND---IPRILVGNKCDL--RNAIQVPTDLAQKF-ADTHSMPLFETSAKNPNDNDHVEAIFMTLA-HKLKS 199
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAS_BOTFU (Ras-like protein OS=Botryotinia fuckeliana GN=ras1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17 Identity = 60/199 (30.15%), Postives = 98/199 (49.25%), Query Frame = -2 Query: 282 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQP----------RSSGCEC 848 GVGK+ L Q + F ++Y TI D K+ ++ + L + DTAGQE + ++ + R + +LVY + S +SF+ + ++++ L D D FP +V+GNK D++G R VS+++ + A + ETSAK INV+ AF I + + +E Y N+ P + SGC C Sbjct: 18 GVGKSCLTIQLIQSHFVDEYDPTI-EDSYRKQCVIDEEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQIL---RVKDKDYFPIIVVGNKCDLEG--ERQVSKQEGQQ-LADDFGCKFIETSAKSRINVDNAFYDIVREIRRYNKEMAGYTAGGASGANNGGPQGKMEVSEGEKESGCCC 209
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASW_DICDI (Ras-like protein rasW OS=Dictyostelium discoideum GN=rasW PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17 Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = -2 Query: 393 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 854 D GVGKT++ Q+++ F Y TI D K+ +D+++ L I DTAGQ+ ++ + R + +LVY V S SFD + +RE+ + D D+ P +++GNKID+D E K A C + + E SAK NVEE F Sbjct: 17 DGGVGKTAVTIQFISNHFVYYYDPTI-EDSYRKQCLVDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQIQFFREQII---RVLDSDDVPIMMIGNKIDLDDERQVTFQEGKDLARCL---GMSFMEVSAKNRTNVEEVF 163
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASH_MSVHA (Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17 Identity = 60/189 (31.75%), Postives = 98/189 (51.85%), Query Frame = -2 Query: 282 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 848 GVGK++L Q + F ++Y TI D K+V + L I DT GQE + ++ + R + + V+ +N+ KSF++++ +RE+ D D+ P V++GNK D+ G R V ++A+ S G IPY ETSAK VE+AF + + ++ + ++ PD S P C+C Sbjct: 65 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQI---KRVKDSDDVPMVLVGNKCDLAG---RTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVRE-IRQHKLRKLNPPD------ESGPGCMSCKC 238
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAN_DROME (GTP-binding nuclear protein Ran OS=Drosophila melanogaster GN=ran PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.869e-17 Identity = 49/173 (28.32%), Postives = 83/173 (47.98%), Query Frame = -2 Query: 336 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLP 854 D G GKT+ + +++ +F +Y AT+G + +WDTAGQE+F L +Y C V+++DV S ++ N+ NW + + +N P V+ GNK+D+ + S R K N+ Y++ SAK N E+ F +A+ + E + +P Sbjct: 18 DGGTGKTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVLCGNKVDIKDRKVKAKSIVFHR-----KKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVAMP 180
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.747e-17 Identity = 56/169 (33.14%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 348 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 854 D GVGK++L Q + F ++Y TI D K+ + + L + DTAGQE + ++ + R + +LVY++ S SFD ++ + ++ L D D FP V++ NK D++ RVVS + A + Y ETSAK +NVEEAF + + + + EE Sbjct: 16 DGGVGKSALTIQLIQSHFVDEYDPTI-EDSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQIL---RVKDKDTFPVVLVANKCDLEA--ERVVSRAEGEQ-LAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEE 177
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASH_MSVNS (GTPase HRas OS=Murine sarcoma virus NS.C58 GN=H-RAS PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.747e-17 Identity = 60/189 (31.75%), Postives = 99/189 (52.38%), Query Frame = -2 Query: 282 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N+ KSF++++ +RE+ D D+ P V++GNK D+ +R V ++A+ S G IPY ETSAK VE+AF + + ++ + ++ PD S P C+C Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQI---KRVKDSDDVPMVLVGNKCDL---AARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVRE-IRQHKLRKLNPPD------ESGPGCMSCKC 186
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASH_HUMAN (GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.747e-17 Identity = 60/189 (31.75%), Postives = 99/189 (52.38%), Query Frame = -2 Query: 282 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSGCEC 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N+ KSF++++ +RE+ D D+ P V++GNK D+ +R V ++A+ S G IPY ETSAK VE+AF + + ++ + ++ PD S P C+C Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQI---KRVKDSDDVPMVLVGNKCDL---AARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVRE-IRQHKLRKLNPPD------ESGPGCMSCKC 186 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |