CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAS2_HYDMA (Ras-like protein RAS2 OS=Hydra magnipapillata GN=RAS2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.429e-16 Identity = 57/168 (33.93%), Postives = 89/168 (52.98%), Query Frame = -2 Query: 354 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIA---KNALKSGEE 848 GVGK++L Q++ F Y TI D K+ +D++ L I DTAGQE F ++ + R + +LV+ V SFD + + + L D + FP +++GNK D++ N R VS +A+ K + Y E+SAK+ INV+ AF + +NA K+ E Sbjct: 18 GVGKSALTIQFIQSHFVQDYDPTI-EDSYRKQCVIDDKVAHLDILDTAGQEEFSAMRDEYMRTGEGFLLVFSVTDRSSFDEIPRFHTQIL---RVKDIEEFPMILVGNKSDLE--NERTVSTAEAQE-LGRKLKVSYLESSAKQRINVDAAFHDLVRAIRNANKASVE 178
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.429e-16 Identity = 48/154 (31.17%), Postives = 79/154 (51.30%), Query Frame = -2 Query: 393 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF 854 D G GKT+L+ +++ +F QY AT+G + +F + +WDTAGQER+ L ++ + C ++++DV S +++N+ W + + N P V+ GNK+D+ + KK + K NI E SAK NVE+ F Sbjct: 18 DGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDLVRVCG-----NIPIVICGNKVDI----MHKKTWKKGVDF-DRKTNIYLIEMSAKSNYNVEKPF 161
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB28_PONAB (Ras-related protein Rab-28 OS=Pongo abelii GN=RAB28 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.429e-16 Identity = 66/204 (32.35%), Postives = 96/204 (47.06%), Query Frame = -2 Query: 288 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRL-FTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVL-GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKN----ALKSGEEEEIYLPDTIDVGNSSQ---------PRSSGC 854 D GKTSL + + F +YK TIG DF + + L TLQIWD GQ + + GA +LVYD+ + +SF+NL +W +++ + + P V L GNKID++ + R + +K +C G +F SAK G +V FQ +A L E E+ D+ N +Q PRSS C Sbjct: 20 DGASGKTSLATCFAQETFGKRYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYT--VVKKVSEESETRPLVALVGNKIDLE--HMRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKVAAEILGIKLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMC 218
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAB17_HUMAN (Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.429e-16 Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = -2 Query: 351 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 845 VGK+SL +YV F + T+G F TK V L+IWDTAGQE++ S+ ++RGA+ +LVYD+ SF W ++ + P + +++GNK D+ R V+ ++ + + S+ + + ETSAK V E F +A+ L+ +EE Sbjct: 30 VGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGE---VLVMLVGNKTDL--SQEREVTFQEGKEFADSQ-KLLFMETSAKLNHQVSEVFNTVAQELLQRSDEE 187
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASN_PONAB (GTPase NRas OS=Pongo abelii GN=NRAS PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16 Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = -2 Query: 378 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N+ KSF ++N +RE+ D D+ P V++GNK D+ +R V K+A S G IP+ ETSAK VE+AF + + Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGLLCVFAINNSKSFADINLYREQI---KRVKDSDDVPMVLVGNKCDLP---TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVR 161
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASN_CHICK (GTPase NRas OS=Gallus gallus GN=NRAS PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16 Identity = 55/157 (35.03%), Postives = 86/157 (54.78%), Query Frame = -2 Query: 378 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N+ KSF ++N +RE+ D D+ P V++GNK D+ +R V K+A+ S G IP+ ETSAK VE+AF + + Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQI---KRVKDSDDVPMVLVGNKCDLP---TRTVDTKQAQELAKSYG-IPFIETSAKTRQGVEDAFYTLVR 161
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASK_RIVMA (GTPase KRas OS=Rivulus marmoratus GN=kras PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16 Identity = 54/165 (32.73%), Postives = 91/165 (55.15%), Query Frame = -2 Query: 354 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N+ KSF++++++RE+ D ++ P V++GNK D+ +R V K+A+ S G IP+ ETSAK V++AF + + K E+ Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQI---KRVKDSEDVPMVLVGNKYDLP---TRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREIRKHKEK 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAN3_ORYSJ (GTP-binding nuclear protein Ran-3 OS=Oryza sativa subsp. japonica GN=RAN3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16 Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = -2 Query: 378 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 854 D G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W ++ DN P V+ GNK+D+ +R V K K N+ Y+E SAK N E+ F +A+ Sbjct: 25 DGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVC-----DNIPIVLCGNKVDM---KNRQVKAKMVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 173
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAN3_ORYSI (GTP-binding nuclear protein Ran-3 OS=Oryza sativa subsp. indica GN=RAN3 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.172e-16 Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = -2 Query: 378 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 854 D G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W ++ DN P V+ GNK+D+ +R V K K N+ Y+E SAK N E+ F +A+ Sbjct: 25 DGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKDICRVC-----DNIPIVLCGNKVDM---KNRQVKAKMVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 173
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RB32C_DICDI (Ras-related protein Rab-32C OS=Dictyostelium discoideum GN=rab32C PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 4.143e-16 Identity = 50/165 (30.30%), Postives = 82/165 (49.70%), Query Frame = -2 Query: 348 GKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 842 GKTS++ +Y + F +YK TIG DF K ++ + LQ+WD AGQERF + +++ A V+V+D +F W+++ + +N P ++L NK D+ + +C YF TSAKE + EA + + K L+S + +E Sbjct: 40 GKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVLLQLWDIAGQERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDI---DYCFNNENLPTILLANKCDL--LTPPYTFPEDINTFCEQNRFNKYFYTSAKEDTGINEALEELVKIILESYQTQE 199 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |