CB290279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.143e-16 Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = -2 Query: 378 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 854 D G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W + +N P V+ GNK+DV +R V K+ K N+ Y+E SAK N E+ F +A+ Sbjct: 21 DGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASK_XENLA (GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.067e-16 Identity = 54/165 (32.73%), Postives = 91/165 (55.15%), Query Frame = -2 Query: 354 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N++KSF++++++RE+ D ++ P V++GNK + SR V K+A+ S G IP+ ETSAK V++AF + + K E+ Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNIKSFEDIHHYREQI---KRVKDSEDVPMVLVGNKCALP---SRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREIRKHKEK 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAS3_DROME (Ras-like protein 3 OS=Drosophila melanogaster GN=R PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 7.067e-16 Identity = 54/167 (32.34%), Postives = 92/167 (55.09%), Query Frame = -2 Query: 348 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEE 848 GVGK++L Q+V F +Y TI D K+V+ + + L+I DTAG E+F ++ + + VLVY + + +F++L + RE+ L D D+ P V++GNK D++ RVV ++ + A++ N + ETSAK +NV + F + + K E++ Sbjct: 13 GVGKSALTVQFVQCIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLQDLREQIL---RVKDTDDVPMVLVGNKCDLE--EERVVGKELGKN-LATQFNCAFMETSAKAKVNVNDIFYDLVRQINKKSPEKK 172
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAS1_DROMO (Ras-like protein 1 OS=Drosophila mojavensis GN=Ras85D PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.067e-16 Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = -2 Query: 351 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + +LV+ VNS KSF+++ +RE+ D + P V++GNK D+ N A + IPY ETSAK + V++AF + + K + + Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQI---KRVKDAEEVPMVLVGNKCDLPSWN------------VAKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK 162
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAYL_HUMAN (Putative GTP-binding protein RAY-like OS=Homo sapiens GN=RABL4 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16 Identity = 58/163 (35.58%), Postives = 84/163 (51.53%), Query Frame = -2 Query: 378 DSGVGKTSLMNQYVNK--KFSNQYKATIGADFLTKEVQFEDRLFTLQ--IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAK 854 D VGKT+L + + F Y T G D + K V D +++ I+D+AG+E F + + + LVYDV + +SF+N + W E+ QA + P V++GNK D+ G R V +ARAW +G + FETS KE N E F C+AK Sbjct: 13 DPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGI---SLPGVLVGNKTDLAG--RRAVDSAEARAWALGQG-LECFETSVKEMENFEAPFHCLAK 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAS_ARTSA (Ras-like protein (Fragment) OS=Artemia salina PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16 Identity = 59/186 (31.72%), Postives = 96/186 (51.61%), Query Frame = -2 Query: 291 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEEIYLPDTIDVGNSSQPRSSG 848 GVGK++L Q + F ++Y TI D ++V + L I DTAGQE + ++ + R + +LV+ VN+ KSF++++ +RE+ D + P V++GNK D+ +R V +AR A + IP+ ETSAK + V++ F + + K D + GNSS+ SG Sbjct: 2 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRQQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNNAKSFEDISAYREQI---KRVKDAEEVPMVLVGNKCDLP---TRAVDMSQARE-VARQYGIPFVETSAKTRMGVDDGFYTLVREIKK----------DKMKKGNSSRRGRSG 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RASK_MONDO (GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16 Identity = 54/165 (32.73%), Postives = 90/165 (54.55%), Query Frame = -2 Query: 354 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEE 848 GVGK++L Q + F ++Y TI D K+V + L I DTAGQE + ++ + R + + V+ +N+ KSF++++++RE+ D ++ P V++GNK D+ SR V K+A+ S G IP+ ETSAK ++AF + + K E+ Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQI---KRVKDSEDVPMVLVGNKCDLP---SRTVDTKQAQDLARSYG-IPFIETSAKTRQGGDDAFYTLVREIRKHKEK 169
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAN_DICDI (GTP-binding nuclear protein Ran OS=Dictyostelium discoideum GN=ranA PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16 Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = -2 Query: 327 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAF-----QCIAKNALKSGEEEEIYLPDTI 854 D GVGKT+ + +++ +F +Y T+G +WDTAGQE+F L +Y +C ++++DV S S+ N+ NW + +N P V+ GNK+DV R V K ++ + N+ Y++ SAK N E+ F + + A+ ++ + LP+T+ Sbjct: 14 DGGVGKTTFVQRHLTGEFEPRYIPTLGVSVHPLIFYTNFGKIHFNVWDTAGQEKFGGLRDGYYIQGNCAIIMFDVTSRISYKNVPNWHSDLTRVC-----ENIPIVLCGNKVDV---KDRKV--KPSQIVFHRRYNLSYYDVSAKSNYNFEKPFVWLTSKLLGNKAVTLVQQPTLKLPETV 184
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16 Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = -2 Query: 360 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 854 D G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV + ++ N+ W + +N P V+ GNK+DV +R V K+ K N+ Y+E SAK N E+ F +A+ G Sbjct: 21 DGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDG 175
BLAST of CB290279 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.230e-16 Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = -2 Query: 360 DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSG 854 D G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV + ++ N+ W + +N P V+ GNK+DV +R V K+ K N+ Y+E SAK N E+ F +A+ G Sbjct: 21 DGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDG 175 The following BLAST results are available for this feature:
BLAST of CB290279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290279 ID=CB290279; Name=CB290279; organism=Citrus sinensis; type=EST; length=855bpback to top |