CB290285

Overview
NameCB290285
Unique NameCB290285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length402
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.398e-19
Identity = 53/115 (46.09%), Postives = 75/115 (65.22%), Query Frame = 1
Query:   52 MASETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGAD 396
            M+SET    F AE  QL+ L++++ YSNK++FLRELISN+SDALDK+   SL  K       +L I I  D    +L++ D+GIGM++ ++V  +GTIA+SGT E +  L   AD
Sbjct:    1 MSSET--LEFQAEARQLLQLMVHSIYSNKDVFLRELISNASDALDKLRLASLRDKDLDVDTADLHIAIEIDPDARTLTVRDNGIGMSRDEVVQVIGTIAKSGTAELLRTLRESAD 113          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_RICCK (Chaperone protein htpG OS=Rickettsia canadensis (strain McKiel) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.398e-19
Identity = 48/102 (47.06%), Postives = 70/102 (68.63%), Query Frame = 1
Query:   79 FLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALA 384
            F AE+ ++++L+I++ YSNKEIF+RELISN+SDA DK+ + S +  + +       I +  DK N  + I D+GIGM K DL+  LGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNNTLVAGDSNFKITVKIDKNNGQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_PSYCK (Chaperone protein htpG OS=Psychrobacter cryohalolentis (strain K5) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.398e-19
Identity = 51/122 (41.80%), Postives = 76/122 (62.30%), Query Frame = 1
Query:   19 DSFLVERQVVSMASETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALA 384
            DS  V++    +   T    F AE+ QL+ L+ ++ YSN +IF+REL+SN+SDA DK+ FE+    S      EL I I  D+   +++  D+GIGM +AD +  LGTIA+SGTK F++ L+
Sbjct:   13 DSINVDKSSPELKKHT----FEAEVAQLLHLVTHSLYSNSDIFVRELVSNASDACDKLRFEATNDDSLYEDDGELKIRIAVDEDAKTITFTDNGIGMNEADAIENLGTIAKSGTKAFLDKLS 130          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_FRASC (Chaperone protein htpG OS=Frankia sp. (strain CcI3) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.398e-19
Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 1
Query:   52 MASETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAGAD 396
            M++   T  F AE  QL+ L++++ YSNK+IFLRELISN+SDALDK+   SL          +L I I  D    +L++ D+GIGM++ ++V  +GTIA+SGT E +  L    D
Sbjct:    1 MSTRVETLEFQAEARQLLQLMVHSIYSNKDIFLRELISNASDALDKLRIASLVKDGPRVDSADLRIEIEADVNARTLTVRDNGIGMSRDEVVGLIGTIAKSGTAELLRKLRESED 115          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_ANAMM (Chaperone protein htpG OS=Anaplasma marginale (strain St. Maries) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.398e-19
Identity = 46/104 (44.23%), Postives = 74/104 (71.15%), Query Frame = 1
Query:   79 FLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALAAG 390
            F AE+ +++SL++++ Y+NK+IFLRE+ISN+SDA DK+ +   + +S + A  EL I I  D+    L++ D+GIGM++ +L++ LGTIA SGT+ F+E    G
Sbjct:    9 FSAEVGKVLSLVVHSLYTNKDIFLREVISNASDACDKLRYLFCSDQSLMEAGEELRIVISVDRDRRELTVRDNGIGMSRKELIDNLGTIASSGTQRFLEEFKGG 112          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 1
Query:   79 FLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALA 384
            F AE+ ++++L+I++ YSNKEIF+RELISN+SDA DK+ + S +    +       I +  DK N  + I D+GIGM K DL+  LGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELISGDSNFKIIVKVDKDNEQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_RICPR (Chaperone protein htpG OS=Rickettsia prowazekii GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 1
Query:   79 FLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALA 384
            F AE+ ++++L+I++ YSNKEIF+RELISN+SDA DK+ + S +    +       I +  DK N  + I D+GIGM K DL+  LGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELIAGDSNFKIIVKVDKDNGQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_PSYA2 (Chaperone protein htpG OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 1
Query:   61 ETPTFAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEALA 384
            E     F AE+ QL+ L+ ++ YSN +IF+REL+SN+SDA DK+ FE+    S      EL I I  D+   +++  D+GIGM +AD +  LGTIA+SGTK F++ L+
Sbjct:   13 ELKKHTFEAEVAQLLHLVTHSLYSNSDIFVRELVSNASDACDKLRFEATNDDSLYEDDGELRIRIAVDEDAKTITFTDNGIGMNEADAIENLGTIAKSGTKAFLDKLS 120          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_CHLCH (Chaperone protein htpG OS=Chlorobium chlorochromatii (strain CaD3) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19
Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 1
Query:   73 FAFLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEFMEAL 381
            F + AE+ QL+ LII++ Y++ EI+LRELISN+SDAL K  F +LT +  L    EL I +  +    S+ I DSGIGMT+ +L+  LGT+A+SGT  FM++L
Sbjct:   16 FEYKAEMKQLLDLIIHSLYTHPEIYLRELISNASDALSKARFNALTDQDMLDKDAELAIRLTLNAEEKSVVIEDSGIGMTEEELIANLGTVAKSGTLGFMQSL 118          
BLAST of CB290285 vs. ExPASy Swiss-Prot
Match: HTPG_BACSU (Chaperone protein htpG OS=Bacillus subtilis GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19
Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 1
Query:   79 FLAEINQLVSLIINTFYSNKEIFLRELISNSSDALDKIGFESLTYKS*LYAQPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNKLGTIARSGTKEF 369
            F AE  +L+ ++IN+ Y+ KEIFLRELISNSSDA+DKI +++LT  +  + +   +I +  DK   +L+I D+GIGMTK +L   LGTIA+SG+  F
Sbjct:    6 FKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDSYYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAF 102          
The following BLAST results are available for this feature:
BLAST of CB290285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_SALTO3.398e-1946.09Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_RICCK3.398e-1947.06Chaperone protein htpG OS=Rickettsia canadensis (s... [more]
HTPG_PSYCK3.398e-1941.80Chaperone protein htpG OS=Psychrobacter cryohalole... [more]
HTPG_FRASC3.398e-1943.48Chaperone protein htpG OS=Frankia sp. (strain CcI3... [more]
HTPG_ANAMM3.398e-1944.23Chaperone protein htpG OS=Anaplasma marginale (str... [more]
HTPG_RICTY4.438e-1947.06Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_RICPR4.438e-1947.06Chaperone protein htpG OS=Rickettsia prowazekii GN... [more]
HTPG_PSYA24.438e-1944.44Chaperone protein htpG OS=Psychrobacter arcticus (... [more]
HTPG_CHLCH4.438e-1948.54Chaperone protein htpG OS=Chlorobium chlorochromat... [more]
HTPG_BACSU4.438e-1949.48Chaperone protein htpG OS=Bacillus subtilis GN=htp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ae10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ae10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290285 ID=CB290285; Name=CB290285; organism=Citrus sinensis; type=EST; length=402bp
TGGTTATAAGTGGGAAGAGATAGTTTTTTGGTTGAACGGCAGGTCGTTTC
GATGGCATCAGAGACACCGACGTTTGCCTTTCTGGCTGAGATCAACCAGT
TGGTGAGTTTGATCATCAACACCTTTTACAGTAACAAGGAGATCTTTCTT
CGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATAAGATCGGATTTGA
AAGCTTGACATACAAGAGCTAGCTATATGCCCAACCAGAGCTTTTCATTC
ACATTATCCCTGATAAGACCAACAACTCATTGTCTATTATTGACAGTGGT
ATTGGCATGACTAAGGCTGATTTGGTGAACAAGCTTGGGACAATTGCTAG
GTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTGA
GC
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