CB290290
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290290 vs. ExPASy Swiss-Prot
Match: APMAP_CHICK (Adipocyte plasma membrane-associated protein OS=Gallus gallus GN=APMAP PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29 Identity = 81/243 (33.33%), Postives = 123/243 (50.62%), Query Frame = -1 Query: 17 FGLLKVGPEGG---LATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVFLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLK-TSKAGTIEIVAQLPGFPDNIKRSPRGGFWVGIHSRRKGIFKLVLSF----PWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISDQGNVLEILEEIGRKMWRSISEVEGKDGNLWIGSVNMPY 721 +GL +V P G + + T EG F N L + Q IYFTDSSS++QRR+ + +++ G GRL++YD TK+V V + L FPNGV LS +++L+ ET RI RY++ K G V +PG PDNI+ S GG+WV + R +L F PWI ++ KL ++ KL + + +S+ G+ + +SE +G L++GS P+ Sbjct: 169 YGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQDGRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAEDFVLVLETAMARIRRYYVSGLMKGGADMFVENMPGLPDNIRLSSSGGYWVAMPVVRPNPGFSMLDFLSEKPWIKRMIFKL-----LSQETVTKLLPKRSLVVELSETGSYRRSFHDPTGLTVPYVSEAHEHNGYLYLGSFRSPF 406
BLAST of CB290290 vs. ExPASy Swiss-Prot
Match: STS3_ARATH (Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28 Identity = 81/237 (34.18%), Postives = 115/237 (48.52%), Query Frame = -1 Query: 11 GLLKVGPEGGLATAVATQSEGIPFRFCNSLDIDQSTGIIYFTDSSSQFQRRNHISVILSGDKTGRLMKYDPATKQVTVFLGNLSFPNGVALSEDGNYILLAETTSCRILRYWLKTSKAGTIEIVAQLPGFPDNIKR-SPRGGFWVGIHSRRKGIFKLVLSFPWIGNVLIKLPIDIVKIHSSLVKLSGNGGMAMRISDQGNVLEILEEIGRKMWRSISEVEGKDGNLWIGSVNMPYAG 718 GL + GGLA +A G PF F + LD+D +TG++YFT SS F R+ + + + D TG+ KYDP+ K VTV + LS G A+S DG+++L+ + T I RYW+K SKAGT E PDNIKR G FWV +V + S A+++S G VL+ + + +SEV G L+IG++ P+AG Sbjct: 121 GLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVYFTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLVGQFTKSNIKRYWIKGSKAGTSEDFTNSVSNPDNIKRIGSTGNFWVA---------------------------SVVNSATGPTNPS-----AVKVSSAGKVLQTIPLKDKFGDTLVSEVNEYKGQLYIGALFGPFAG 325 The following BLAST results are available for this feature:
BLAST of CB290290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290290 ID=CB290290; Name=CB290290; organism=Citrus sinensis; type=EST; length=721bpback to top |