CB290296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.312e-23 Identity = 48/106 (45.28%), Postives = 75/106 (70.75%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A ++++++ HP IG GYAPV+ HT+ + V+ ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E F D+PP G FA+RDM +T+A G I V+ Sbjct: 332 AEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.312e-23 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A F +QV++++HP + GY PV CHT+ IA F EL+ K+D R+G+ E+ P FLK GDA +VK+ P +PMV+E + P G FAVRDM T+A GV ++ K Sbjct: 315 AEEFIAQVVVLHHPSALTVGYTPVFHCHTAQIACSFVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITPK 422
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.086e-22 Identity = 48/100 (48.00%), Postives = 69/100 (69.00%), Query Frame = -1 Query: 440 NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVI 739 +FT+Q++++ HP I GY PV+ HT+ IA +F EL KID R+G+ E+ P+FLK GDA +VK+ P +PMV+E D PP G FA+RDM T+ G++ Sbjct: 317 DFTAQLVVLQHPTAITVGYTPVVHAHTAQIACRFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMGRFAIRDMGMTIGAGMV 416
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A FT+Q++++ HP I GY PV CHT+ IA F EL K+D RSG+ E+ P FLK+GDA +V++ P +PMV+E+ + P G FA+RDM T+A G+ V+ K Sbjct: 315 ADEFTAQIVVLQHPSAITVGYTPVFHCHTAQIACTFVELRKKLDPRSGQTKEENPTFLKSGDAAIVQIKPSRPMVIESVKEIPQLGRFAIRDMGTTIAAGMCIAVQPK 422
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22 Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A FT+QV+++ HP I GY PV CHT+ A F EL K+D RSG+ E+ P FLK GDA +V++ P KPMV+E + P G FAVRDM T+A G+ ++ K Sbjct: 315 ADEFTAQVVVLQHPSAITVGYTPVFHCHTTQTACTFIELKKKLDPRSGQTKEENPTFLKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQPK 422
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22 Identity = 49/101 (48.51%), Postives = 68/101 (67.33%), Query Frame = -1 Query: 443 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGV 745 A FT+Q++++ HPG I GY PV CHT+ +A F ELV K++ +G+ E+ P FLK G+A +VK+ P KP+V+E D P G FA+RDM QTVA G+ Sbjct: 305 AKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.852e-22 Identity = 51/108 (47.22%), Postives = 69/108 (63.89%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A FT+QV+++ HP + GY PV CHTS A F EL K+D RSG+ E+ P FLK GDA + + P +P+V+ET + P G FAVRDM TVA G++ +V+ K Sbjct: 315 AEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.418e-22 Identity = 48/111 (43.24%), Postives = 75/111 (67.57%), Query Frame = -1 Query: 419 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 751 R F +Q+I++NHP I GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + P K MV+E + P G FA+RDM QTVA G++ +++K + Sbjct: 318 RPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.418e-22 Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = -1 Query: 422 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 736 FT+Q+I++NHP I GY PV HT+ +A + E+V ++ + G L+++P F+KNGD +VK+IP KP+V+E + P G FAVRDM QTVA G ++EK+ Sbjct: 320 FTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.418e-22 Identity = 48/106 (45.28%), Postives = 74/106 (69.81%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A FT++V I+ HP I GY PV+ HT+ +A + E+ K+D R+GK +E+ P+F+K GDA +V+ P KP+VVE + D+PP G FA+RDM +T+ +GV+ +V+ Sbjct: 324 AEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429 The following BLAST results are available for this feature:
BLAST of CB290296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290296 ID=CB290296; Name=CB290296; organism=Citrus sinensis; type=EST; length=751bpback to top |