CB290296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.418e-22 Identity = 46/101 (45.54%), Postives = 74/101 (73.27%), Query Frame = -1 Query: 428 SQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 730 ++++++ HP IG GYAPV+ HT+ + V+ EL++K+D R+G+ +E++P+F+K GD +VK+ P KP+V E F D+PP G FA+RDM +T+A G I V+ Sbjct: 337 ARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELISKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22 Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 A +FT+Q++++ HP + +GY PV HT+ IA F E+ K++ +G+ LE+ P FLK GDA +VK+IP KPMV+E+ + P G FA+RDM TVA G+ V K+ Sbjct: 319 ATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 431 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNV 745 A F +Q++++ HPG I GY PV CHTS +A F EL K+D +G+ E+ P FLK G+A VK+ P KPMV+E P G FA+RDM QTVA G+ +V Sbjct: 305 AKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAEENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGLCIDV 409
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22 Identity = 46/109 (42.20%), Postives = 74/109 (67.89%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 A FT ++ ++ HP I GY PVL HT+ + V F EL+ K+D R+G E++P+++K GD+ +V+ P KP+VVE + ++PP G FA+RD +T+A GV+ +V+K + Sbjct: 323 AEEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPVTFEELLQKLDPRTGSVAEEKPQYIKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIAAGVVIDVKKAE 431
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22 Identity = 46/106 (43.40%), Postives = 73/106 (68.87%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A FT+++ ++ HP I GY PV+ HT+ IA + E+ K+D R+G+ +EK P+FLK GDA +VK P KPMV+E + ++P G FA+RDM +T+ +G++ +V+ Sbjct: 325 AEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22 Identity = 47/106 (44.34%), Postives = 71/106 (66.98%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A FT+++++M HP I GY PV+ HT+ +A + E++ KID R+GKE+EK P FLK GD +VK P KP+VVE + D+ G FA+RDM +T+ +G + ++ Sbjct: 325 ADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.388e-22 Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++P KP+V+E+ + P G FA+RDM TVA G+ V K+ Sbjct: 319 AADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22 Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = -1 Query: 431 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNV 745 A FT+Q++++ HP I GY PV CHT+ +A E+ K+D R+G E+ P F+K GDA ++ + P KPMV+E + P G FA+RDM T+A G+ +NV Sbjct: 317 AKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22 Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A FT++V ++ HP I GY PV+ HT+ +A + E+ KID R+GK +E+ P FLK GDA +V P KPMV+E F ++ P G FA+RDM +TV +G++ +V+ Sbjct: 327 ADQFTARVFVIWHPSAIAVGYTPVIHAHTASVASRIIEIKQKIDPRTGKVIEENPSFLKPGDAAVVVFKPLKPMVIEKFQEFQPLGRFAMRDMGKTVGIGIVTDVK 432
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22 Identity = 49/109 (44.95%), Postives = 71/109 (65.14%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 A +FT+Q++++ HP + GY PV HT+ IA F E+ K++ +G+ LE+ P FLK GDA +VK+IP KPMV+E+ + P G FA+RDM TVA G+ V K+ Sbjct: 319 ATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 The following BLAST results are available for this feature:
BLAST of CB290296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290296 ID=CB290296; Name=CB290296; organism=Citrus sinensis; type=EST; length=751bpback to top |