CB290296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22 Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++P KP+V+E+ + P G FA+RDM TVA G+ V K+ Sbjct: 319 AADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22 Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++P KP+V+E+ + P G FA+RDM TVA G+ V K+ Sbjct: 319 AADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.190e-22 Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++P KP+V+E+ + P G FA+RDM TVA G+ V K+ Sbjct: 319 AADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.200e-21 Identity = 48/106 (45.28%), Postives = 74/106 (69.81%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A ++V+I+ HP IG GYAPV+ HT+ + V+ ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E F ++P G FA+RDM +T+A G I V+ Sbjct: 332 AEEIVARVVILWHPTAIGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSEFPALGRFALRDMGRTIAAGQIIEVK 437
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.568e-21 Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 422 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 736 FT+Q++++NHP I GY PV HT+ +A K E+V ++ + G L+ +P F+K GD +VK+IP KP+V+E + P G FAVRDM QTVA G ++EK+ Sbjct: 320 FTAQIVVLNHPSVIAPGYKPVFHVHTAQVACKIDEIVRTLNPKDGTTLKDKPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 45/109 (41.28%), Postives = 74/109 (67.89%), Query Frame = -1 Query: 425 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEK 751 R F +Q+I++NHP I GY+PVL HT+ I V+F +++ K+D R+G +E+ P+F+K GD+ +V + P KP+V+E + P G FA+RDM T+A G++ +++K Sbjct: 318 RTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK 426
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 46/109 (42.20%), Postives = 73/109 (66.97%), Query Frame = -1 Query: 425 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEK 751 R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ KID R+G E+ P+F+K GD+ +V + P KP+V+E + P G FA+RDM T+A G++ +++K Sbjct: 318 RTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.674e-21 Identity = 44/108 (40.74%), Postives = 72/108 (66.67%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A F +Q+I+++HP + GY PV+ CHT+ +A E V+KI+ +G E+ PKFLK GD+ ++K+ P +P +ETF ++P G FA+RDM T+A G++K + ++ Sbjct: 326 AKEFLAQIIVIHHPTALAPGYTPVMHCHTAQVAAIMSEFVSKINPATGAVEEENPKFLKVGDSAIIKIRPVRPTPIETFKEFPEMGRFALRDMGATIAAGIVKEITEE 433
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.957e-21 Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = -1 Query: 419 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKKD 745 A FT+Q++++ HP + GY PV HT+ +A F EL K++ +G+ E+ P FLK GDA +VK++P KPMV+E + P G FA+RDM TVA G+ +V+ K+ Sbjct: 319 AEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMCIDVKAKN 427
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.780e-21 Identity = 44/109 (40.37%), Postives = 74/109 (67.89%), Query Frame = -1 Query: 425 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEK 751 R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P G FA+RDM T+A G++ ++++ Sbjct: 320 RTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 428 The following BLAST results are available for this feature:
BLAST of CB290296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290296 ID=CB290296; Name=CB290296; organism=Citrus sinensis; type=EST; length=751bpback to top |