CB290296
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.780e-21 Identity = 44/109 (40.37%), Postives = 74/109 (67.89%), Query Frame = -1 Query: 425 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEK 751 R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P G FA+RDM T+A G++ ++++ Sbjct: 318 RTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 426
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.780e-21 Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A F Q++++ HP I GY PV HTS IA + EL K+D +SG+ E+ P FLK GDA +V + P KPMV+E + P G FA+RDM T+A G+ +V++K Sbjct: 315 ADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.043e-20 Identity = 43/108 (39.81%), Postives = 67/108 (62.04%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A F +QV+++ HP I GY PV CHT+ +A +++ +D ++G E+ P F+K GDA +V + P +P+V+E + P G FA+RDM QTVA GV+ ++ K Sbjct: 319 AVEFKAQVVVLQHPSAITAGYTPVFHCHTAQVACTLTQILATLDPKTGGVKEQNPPFIKTGDAAIVLIRPTRPLVIEKVKEIPQLGRFAIRDMGQTVAAGVVMDITPK 426
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.043e-20 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = -1 Query: 443 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGV 745 A F +Q++++ HPG + GY PV HT+ +A F L K+D +G+ E+ P FLK GDA +V + P KPMV+E + P G FA+RDM QTVA G+ Sbjct: 305 AKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVACTFLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVAAGM 405
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.602e-20 Identity = 42/104 (40.38%), Postives = 68/104 (65.38%), Query Frame = -1 Query: 425 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEK 736 FT+Q++++NHP I GY PV HT+ +A + E+V I+ + G L+++P F+K GD +VK++P + +V+E ++P G FA+RDM TVA G ++EK Sbjct: 320 FTAQIVVLNHPSVIAAGYKPVFHVHTAQVACRIDEIVKTINPKDGTTLKEKPDFIKTGDIAIVKVVPDRALVIEKVSEFPQLGRFAIRDMGMTVAAGQCIDLEK 423
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.602e-20 Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A F Q++++ HP I GY PV HTS IA + L K+D ++G+ E+ P FLK GDA +V + P KPMV+E + P G FA+RDM T+A G+ +V++K Sbjct: 315 ADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIALNKKLDPKTGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.602e-20 Identity = 42/106 (39.62%), Postives = 71/106 (66.98%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A F +++ ++ HP I GY PV+ HT+ ++ + E+ K+D ++G+ +E+ P+FLK GDA +V+ P KP+VVE F + P G FA+RDM +TV +G++ +V+ Sbjct: 323 AEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVK 428
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.123e-19 Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 422 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVEKK 745 A F Q++++ HP I GY PV HTS IA + L K+D ++G+ E+ P F+K GDA +V + P KPMV+E + P G FA+RDM T+A G+ +V++K Sbjct: 315 ADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLISLDKKLDPKTGQVKEEHPTFIKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.123e-19 Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = -1 Query: 473 NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVR 739 +FT+QVI+MNHP +I GY PV+DCHT+HIA +F + K+D+R+ K + P GD +VKM+P KP+ ETF DY P G FAVR Sbjct: 308 SFTAQVIVMNHPKKIQPGYTPVIDCHTAHIACQFQLFLQKLDKRTLKPEMENPPDAGRGDCIIVKMVPQKPLCCETFNDYAPLGPFAVR 396
BLAST of CB290296 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.123e-19 Identity = 42/106 (39.62%), Postives = 70/106 (66.04%), Query Frame = -1 Query: 428 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFFELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPPKPMVVETFFDYPPFGCFAVRDMRQTVAVGVIKNVE 745 A +++ ++ HP IG GY PV+ HT+ + + EL++++D +G+ +E++P+F+K GD MV++ P KP+VVE F D P G F++RDM +TVA G I ++ Sbjct: 331 AEEIVARIAVLEHPTTIGVGYTPVMHVHTATVPTQIIELISRLDPATGQTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPALGRFSLRDMGRTVAAGQIIEIK 436 The following BLAST results are available for this feature:
BLAST of CB290296 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290296 ID=CB290296; Name=CB290296; organism=Citrus sinensis; type=EST; length=751bpback to top |