CB290330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.178e-44 Identity = 95/162 (58.64%), Postives = 119/162 (73.46%), Query Frame = -3 Query: 169 MSLIPSIF--GGRRTNVFDPFSLD-VWDPFDGFLSFALTNAPF--LARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIF 639 MSLIP+ + GRR+N+FDPFSLD +WDPF G S L+ P A ET+ FANARIDWKETP+AHVFKADLPG++ +G +L+ISG+R++E+EEKND WH VERSSG+F+R+FRLP+NAKV+QVKA MENGVLTVT KAI ++ Sbjct: 1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPFFGLPS-TLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKNEAPKPQVKAINVY 161
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.127e-44 Identity = 90/148 (60.81%), Postives = 108/148 (72.97%), Query Frame = -3 Query: 166 RRTNVFDPFSLDVWDPFDGFLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 609 RR+NVFDPFSLD+WDPFD + +T+ FANARIDWKETP++HVFKADLPG++ EG +L ISG+RSKE+E+KNDKWH VERSSG+F+RRFRLP+NAKV+QVKA +ENGVLTVT KAIEI G Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVPATS--DNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.588e-43 Identity = 93/149 (62.42%), Postives = 111/149 (74.50%), Query Frame = -3 Query: 166 RRTNVFDPFSLDVWDPFDG-FLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 609 RR+NVFDPF+ D WDPFDG F S + R+T+ FANAR+DWKETP++HVFKADLPG++ EG +L ISG+RSKE+E+KNDKWH VERSSG+F+RRFRLP+NAKV+QVKASMENGVLTVT KAIEI G Sbjct: 5 RRSNVFDPFA-DFWDPFDGVFRSLVPATSD---RDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.034e-43 Identity = 92/155 (59.35%), Postives = 107/155 (69.03%), Query Frame = -3 Query: 166 RRTNVFDPFSLDVWDPFDGF-------LSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 609 RR N FDPFSLD+WDP DGF S + + P + + FA ARIDWKETP+ HVFKAD+PGL+ +G ILQISGERS+EQEEK+DKWH VERSSGKFLRRFRLP+N K EQ+KASMENGVLTVT K+I+I G Sbjct: 5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQISG 159
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.880e-43 Identity = 91/159 (57.23%), Postives = 111/159 (69.81%), Query Frame = -3 Query: 166 MSLIPSIFGG-RRTNVFDPFSLDVWDPFDGFLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 639 MS+IPS F RR+N+FDPFSLDVWDPF S +L+ RE S NAR+DW+ETP+AHVFKADLPGL+ E +L+ISGER E+E+KND WH VERSSG+F RRFRLP+N K++QVKA+MENGVLTVT K+I+I G Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS------RENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.647e-41 Identity = 89/151 (58.94%), Postives = 111/151 (73.51%), Query Frame = -3 Query: 166 RRTNVFDPFSLDVW-DPFDGFLSF--ALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 609 RR+NVFDPF+ D+W DPFD F S A++ + ET+ FANAR+DWKETP+AHVFK DLPG++ +G +L +SGERS+E+E+KNDKWH VERSSGKF+RRFRLP++AKVE+VKA +ENGVLTVT KAIEI G Sbjct: 5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGG---SSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.803e-40 Identity = 84/141 (59.57%), Postives = 103/141 (73.05%), Query Frame = -3 Query: 172 DPFSLDVWDPFDGF-LSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEI 591 DPFSLDVWDPF F + + +A +E S F + RIDWKETP+AHVFKADLPGL+ + R+LQISGER+ E+E+KND+WH VERSSGKF+RRFRLP+NAK++QVKA+MENGVLTVT K+IEI Sbjct: 1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEI 141
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.781e-40 Identity = 89/151 (58.94%), Postives = 110/151 (72.85%), Query Frame = -3 Query: 166 RRTNVFDPFSLDVW-DPFDGFLSF--ALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 609 RRTNVFDPF+ D+W DPFD F S A++ ET+ FANAR+DWKETP+AHVFKADLPG++ +G +L +SGER+KE+E+KNDKWH VERSSGKF+RRFRL ++AKVE+VKA +ENGVLTVT KAI+I G Sbjct: 5 RRTNVFDPFA-DLWADPFDTFRSIVPAISGG---GSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQISG 151
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.065e-39 Identity = 85/142 (59.86%), Postives = 103/142 (72.54%), Query Frame = -3 Query: 220 MSLIPSIFGGRR--TNVFDPFSLDVWDPFDGFLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 639 MSLIPS FG R ++FDPFSLDVWDPF L F + L+ ETS NAR+DWKET +AHVFKADLPG++ + +L+ISGER E+EEK D WH VERSSG+F R+F+LP+N K++QVKASMENGVLTVT Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKE-LQFPSS----LSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVT 137
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.391e-39 Identity = 84/143 (58.74%), Postives = 99/143 (69.23%), Query Frame = -3 Query: 220 MSLIPSIFGGRR---TNVFDPFSLDVWDPFDGFLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 639 MSLIPS FG R N+FDPFSLDVWDPF F + +S ANAR+DWKET +AHVFKADLPG++ + +L+ISGER E+EEK D WH VERSSG F R+FRLP+N K++QVKASMENGVLTVT Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFK--------ELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVT 135 The following BLAST results are available for this feature:
BLAST of CB290330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290330 ID=CB290330; Name=CB290330; organism=Citrus sinensis; type=EST; length=680bpback to top |