CB290330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 78/154 (50.65%), Postives = 91/154 (59.09%), Query Frame = -3 Query: 166 RRTNVFDPFSLDVW---DPFDGFLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEE--KND-KWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 609 R NV DP S+D W DPF S LA N R+DWKETP AHVF ADLPG+R +G +L ISGER++E++ KND +WH VERSSGKF RRFRLP A+V+QV ASM+NGVLTVT KAI I G Sbjct: 5 RSGNVLDPMSVDFWADADPFGAVRS--------LAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = -3 Query: 220 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 489 AR+DWKETP+ HV D+PGL+ E R+L++SGER KE+E+K D WH VERS GKF R+FRLP N ++ VKA +ENGVLT+T Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLT 156
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24 Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -3 Query: 220 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 495 ++AR+DWKETP+ HV D+PGL+ E R+L++SGER KE+++K D WH VERS GKF R+F+LP N ++ VKA MENGVLT+T Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLT 164
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.113e-23 Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = -3 Query: 220 GGRRTNVFDPFSLDVWDPFDGFLSF-ALTNAPFLARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 615 GG +P S+D+ +PF +S A AP A + + A +DWKET AHVF AD+PG+R E ++L+ISG+R++ EEK ++WH VERSS +F+R RLP NA + V A+++NGVLT+T Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTIT 159
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.545e-22 Identity = 51/100 (51.00%), Postives = 69/100 (69.00%), Query Frame = -3 Query: 223 LARETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 519 L R+TS + AR+DWKET + H D+PGL+ E +L++SGER +E+E+K D+WH VERS GKF R+F+LPDN +E VKA +ENGVLT+ Sbjct: 60 LERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 159
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22 Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = -3 Query: 220 VFDPFSLDVWDPFDGFLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 597 +FD + D W+PF F + +A +LA +TS FAN I+ +ET +A+VF+ADLP G++ EG +L I+GERS +EEK + H +ERS F RF LPD+A V+ V+ASM+ G+LTVT Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVT 131
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 53/74 (71.62%), Postives = 58/74 (78.38%), Query Frame = -3 Query: 166 ILQISGERSKEQEEKNDKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEIFG 387 ILQISGER+ E+E+KND WH VERSSGKF+R FRLPDNAKV+QVKASMENGVLTVT KAIEI G Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 57/154 (37.01%), Postives = 84/154 (54.55%), Query Frame = -3 Query: 223 LSI*LAPQFAIMSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSFALTNAPFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQ--EEKN--DKWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 672 +++ LA A +L+P GG + P L + D F F + + + AR+DW+ET AH D+PG+R + R+L+ISGER +E+ E+K D WH ERS G+F R+ RLPDNA ++ + AS++NGVLTV Sbjct: 16 IAVVLASTAADGALLPWFGGGGARDEAVP-ELGLLAAADPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17 Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = -3 Query: 220 ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEG-RILQISGER-----SKEQEEKND--KWHCVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 516 A E + A AR DWKETP+AHV D+PG+R E R+L++SGER ++E+E + D +WH ER++G+F RRFR+P A V +V A +++GVLTVT Sbjct: 63 AGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVT 169
BLAST of CB290330 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 223 PFLARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHCVERSS-----GKFLRRFRLPDNAKVEQVKASMENGVLTV 525 PF + + A IDW E+ +H+FK ++PG EG +L I GE KE++++N WH ER + +FLRR LP+N KV+QVKA +ENGVLTV Sbjct: 10 PFRRFQEWSRSTALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTV 115 The following BLAST results are available for this feature:
BLAST of CB290330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290330 ID=CB290330; Name=CB290330; organism=Citrus sinensis; type=EST; length=680bpback to top |