CB290336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290336 vs. ExPASy Swiss-Prot
Match: THI4_METJA (Putative thiazole biosynthetic enzyme OS=Methanocaldococcus jannaschii GN=MJ0601 PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 4.354e-15 Identity = 61/187 (32.62%), Postives = 90/187 (48.13%), Query Frame = -1 Query: 267 MVVRKPAHIFLDELGIDY-DEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 824 +VV +PA L E+GI D D Y V + ++ + A K+ + EDLI++ V GVV N + +DP + +KVVV + GH+ VK+ K + +VPG K++ E+A++R TREV P + V GM G RMG FG M +SG+ A L + L Sbjct: 81 IVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDA--GAKILTGIVVEDLILREDGVAGVVINSYAIER---AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNK---LEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELITEKL 259
BLAST of CB290336 vs. ExPASy Swiss-Prot
Match: THI4_THENV (Putative thiazole biosynthetic enzyme OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1052 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.655e-14 Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = -1 Query: 267 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 683 K+ V +D+I +G RV G++ W + M+ S +DP +A+ V+ + GHD + +++ +G+ EV G K+ +E +V T V PG+ GM V + G PRMGP FG M++SG++AA + K L Sbjct: 117 KIILGVHVDDVIFRGDPPRVAGLLWVWTPIQMSG---SHVDPLYTQARAVLDATGHDAEVISIASRKVPELGV--EVRGEKSAWAEVSEKLVVEHTGRVAPGLYAAGMAVCAVHGLPRMGPIFGGMLLSGRRAAEIIHKDL 252
BLAST of CB290336 vs. ExPASy Swiss-Prot
Match: THI4_PYRCJ (Putative thiazole biosynthetic enzyme OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_1555 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.655e-14 Identity = 45/143 (31.47%), Postives = 76/143 (53.15%), Query Frame = -1 Query: 261 KLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 683 K+ V +D+I +G RV G++ W + M+ +DP +AK V+ + GHD + +++ +G+ ++ G K+ +E +V T V PG+ V G+ V + G PRMGP FG M++SG+K A + K L + Sbjct: 117 KILLGVHVDDVIFRGDPPRVAGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGL--QLQGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGRKVAEVVAKDLAE 254
BLAST of CB290336 vs. ExPASy Swiss-Prot
Match: THI4_PYRAE (Putative thiazole biosynthetic enzyme OS=Pyrobaculum aerophilum GN=PAE0175 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.822e-14 Identity = 55/189 (29.10%), Postives = 92/189 (48.68%), Query Frame = -1 Query: 267 MVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 824 +VV++ A L + + Y +D + A L + A K+ V +D+I +G RV G++ W + M+ +DP +AK V+ + GHD + +++ +G+ +V G K+ +E +V T V PG+ V G+ V + G PRMGP FG M++SG+K A + K L Sbjct: 71 IVVQEEAVPILRDFKVRYKPAEDGLYTVDPAELIAKLAAGAVDA--GAKIILGVHVDDVIFRGDPPRVTGLLWIWTPIQMSG---MHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGI--QVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDL 252
BLAST of CB290336 vs. ExPASy Swiss-Prot
Match: THI4_DESMR (Putative thiazole biosynthetic enzyme OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=DMR_31420 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 59/195 (30.26%), Postives = 102/195 (52.31%), Query Frame = -1 Query: 264 MVVRKPAHIFLDELGIDYDE-QDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG----RVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKR--LKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQK-AAHLALKSLG 824 +VV++ + L ++G+ +DNY A T+ + LA K+FN ++ ED++++ RV G+V N + V + +DP V+ +K +V + GH T V++ ++ + G +++ ++AE V+ TRE+ PG+ V GM G+ RMGP FG M++SG+K AA +A K G Sbjct: 74 IVVQEESVHLLTDVGVPVKRYKDNYFTADAVAATTTLASAACLA--GAKIFNCMSVEDVMLREENGVKRVTGIVINSSPVEI---AGLHVDPVVLGSKYLVEATGHAVEVLQTLVRKNDVRLNTPSGGIEGEQSMWADTAEINTVKNTREIFPGLYVAGMAANASYGSYRMGPIFGGMLLSGEKVAADIAAKLKG 263 The following BLAST results are available for this feature:
BLAST of CB290336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290336 ID=CB290336; Name=CB290336; organism=Citrus sinensis; type=EST; length=824bpback to top |