CB290339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.163e-40 Identity = 81/167 (48.50%), Postives = 114/167 (68.26%), Query Frame = 1 Query: 289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ-----------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS C I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ F EAT++ +TF+ A+FDGI+G+ + I+V + +PV+DN+++Q LV + +FSF+L+RDP Sbjct: 71 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDP 237
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.519e-40 Identity = 81/162 (50.00%), Postives = 113/162 (69.75%), Query Frame = 1 Query: 289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 LKN++DAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS C I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ F EAT++ + F+ A+FDGI+G+G+ I+V +PV+DN+++Q LV + +FSF+LNRDP Sbjct: 71 LKNYLDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDLGGIKVEKQIFGEATKQPGVVFIAAKFDGILGMGYPFISVNKVLPVFDNLMKQKLVEKNIFSFYLNRDP 232
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.519e-40 Identity = 80/165 (48.48%), Postives = 114/165 (69.09%), Query Frame = 1 Query: 289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 LKN++DAQY+G+IGIG+PPQ F+V+FDTGSSNLWVPS C I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ F EAT++ + F+ A+FDGI+G+G+ I+V + +PV+DN+++Q LV + +FSF+LNRDP Sbjct: 71 LKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVFDNLMQQKLVDKNIFSFYLNRDP 235
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 4.419e-40 Identity = 84/153 (54.90%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 283 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL 741 +P+ NFM+AQYF EI IG+PPQ F V+ DTGSSNLWVPSS+C SI+CY H++Y+S +S+TY + G S +I YGSGS+SGF SQ F EAT E L F RFDGI+GLG+ IAV P + MVEQ LV E VFSF+L Sbjct: 75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITPPFYKMVEQKLVDEPVFSFYL 226
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39 Identity = 79/165 (47.88%), Postives = 112/165 (67.88%), Query Frame = 1 Query: 289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 LKN+MDAQY+GEIGIG+PPQ F+V+FDTGS+NLWVPS C I+C+ H +Y S KS+TY + G + +I+YGSGS+SG+ SQ F EA ++ + F+ A+FDGI+G+ + I+V + +PV+DN+++Q LV + VFSF+LNRDP Sbjct: 51 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDKNVFSFFLNRDP 215
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 8.335e-39 Identity = 76/156 (48.72%), Postives = 105/156 (67.31%), Query Frame = 1 Query: 289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 LKN++DAQY+GEIG+G+PPQ F+V+FDTGSSNLWVPS C I+C H +Y S KS+TY + G + I YGSGS+SG+ SQ F EA ++ + F+ A+FDGI+G+ + I+V PV+DN++ Q V + VFSF+LNR+P Sbjct: 68 LKNYLDAQYYGEIGLGTPPQPFTVVFDTGSSNLWVPSIHCSLLDIACLLHHKYNSGKSSTYVKNGTAFAIQYGSGSLSGYLSQDTCTIGDLAIDSQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVAPVFDNIMSQKKVEQNVFSFYLNRNP 223
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38 Identity = 78/165 (47.27%), Postives = 110/165 (66.67%), Query Frame = 1 Query: 289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQ---------XXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 L N+MDAQY+GEIGIG+PPQ F+V+FDTGS+NLWVPS C I+C+ H +Y S KS+TY + G + +I+YGSGS+SG+ SQ F EA ++ + F+ A+FDGI+G+ + I+V + +PV+DN++ Q LV + VFSF+LNRDP Sbjct: 46 LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRISVNNVLPVFDNLMRQKLVDKNVFSFFLNRDP 210
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.056e-38 Identity = 77/158 (48.73%), Postives = 101/158 (63.92%), Query Frame = 1 Query: 283 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 +PL N+ D QYFGEIG+G+PPQNF+V FDTGSSNLWVPS +C +FS+ C+ H R+ + S+++ G I YG+G + G S+ F EA E SL F A FDGI+GLGF ++V P D +VEQGL+ + VFSF+LNRDP Sbjct: 68 VPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDP 225
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.215e-38 Identity = 81/178 (45.51%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 232 AGVSGVRHRLG-DSDEDILP--LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 AG + ++H G S P LKN+MDAQY+GEIG+G+P Q F+V+FDTGSSNLW+PS C F+ I+C H +Y KS+TY + G I YGSGS+SG+ SQ F EA ++ + F+ A+FDGI+G+ + I+V PV+D M+ Q V + VFSF+LNR+P Sbjct: 46 AGTNSLQHNQGFPSSNAPTPETLKNYMDAQYYGEIGLGTPVQMFTVVFDTGSSNLWLPSIHCSFTDIACLLHHKYNGAKSSTYVKNGTEFAIQYGSGSLSGYLSQDSCTIGDIVVEKQLFGEAIKQPGVAFIAAKFDGILGMAYPRISVDGVPPVFDMMMSQKKVEQNVFSFYLNRNP 223
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.572e-37 Identity = 77/158 (48.73%), Postives = 101/158 (63.92%), Query Frame = 1 Query: 283 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSI-SCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753 +P+ +F DAQY+G I IG+P Q F V+FDTGSSNLW+PS KC ++ +C H++Y S S+TY G I YGSG++SGF SQ F EAT E + F A+FDGI+GL F+ I+V PV+ NM+ QGLVS +FSFWL+R P Sbjct: 53 IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVFYNMLSQGLVSSTLFSFWLSRTP 210 The following BLAST results are available for this feature:
BLAST of CB290339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290339 ID=CB290339; Name=CB290339; organism=Citrus sinensis; type=EST; length=753bpback to top |