CB290339

Overview
NameCB290339
Unique NameCB290339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.575e-29
Identity = 66/152 (43.42%), Postives = 93/152 (61.18%), Query Frame = 1
Query:  289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            +KN  D +Y+G I IG+PP++F VIFDTGSSNLWV SS C  + +C  H+++K R+S+TY E GK+ ++ YG+G + G   Q                E+  E       A FDGI+GL +  IA   AVPV+DNM  Q LV +++FSF+L+
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLS 156          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.575e-29
Identity = 63/155 (40.65%), Postives = 98/155 (63.23%), Query Frame = 1
Query:  283 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNR 747
            +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS+ WVPS  C  S +C  H R+  RKS+T+  +GK   I YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   +VPV+DNM+++ LV++++FS +++R
Sbjct:   64 VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMMDRRLVAQDLFSVYMDR 217          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29
Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1
Query:  298 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            +MDA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  + +C  H+R+   +S+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+G+ +  +A+G A      M+++G ++  VFSF+L+
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-TQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGMAYPSLAMGGATTALQGMLQEGALTSPVFSFYLS 215          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1
Query:  277 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRD 750
            D  PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+ +  + S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+ D
Sbjct:   64 DEQPLENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACTNHNLFNPQDSSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSAD 220          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 1
Query:  277 DILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRD 750
            D  PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+ +  + S+TY     +  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+ D
Sbjct:   64 DEQPLENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACTNHNLFNPQDSSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSAD 220          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29
Identity = 62/156 (39.74%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  283 LPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRD 750
            +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS+ WVPS  C  S +C  H R+  RKS+T+  +GK   I+YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   ++PV+DNM+ + LV++++FS +++R+
Sbjct:   64 VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN 218          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29
Identity = 67/165 (40.61%), Postives = 97/165 (58.79%), Query Frame = 1
Query:  250 RHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            ++  GD      P+  ++DA YFGEI IG+PPQNF V+FDTGSSNLWVPS  C  S +C  H+R+   KS+TY+  G++  + YGSGS++GFF                F  +  E    F+ A+FDGI+G+ +  +A+G A      M++ G +   VFSF+L+
Sbjct:   53 KYHFGDFSVAYEPMA-YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPSKSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTLQNIKVPHQEFGLSQNEPGENFVYAQFDGIMGMAYPTLAMGGATTALQGMLQAGALDSPVFSFYLS 215          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  286 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S +C  H+R+  + S+TY    ++  I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+
Sbjct:   51 PLQNYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSIYC-SSEACTNHNRFNPQDSSTYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLS 202          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.987e-29
Identity = 63/154 (40.91%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRD 750
            L N++D QYFG+I IG+PPQ F+V+FDTGSS+LWVPS  C  S++C  H R+   KS+T+  + KS  I YG+GS+ G                     +T+E    F  + FDGI+GL +  +A   +VPV+DNM+++ LV++++FS +++R+
Sbjct:   66 LTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVAQDLFSVYMSRN 218          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.021e-28
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 1
Query:  286 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+++    S+T+    +   I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+
Sbjct:   64 PLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLS 215          
The following BLAST results are available for this feature:
BLAST of CB290339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PEP2B_GADMO1.575e-2943.42Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
CHYM_SHEEP1.575e-2940.65Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
PEPC_RHIFE2.058e-2942.28Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
PEPA_MACMU2.058e-2942.77Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA1_MACFU2.058e-2942.77Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
CHYM_BOVIN2.058e-2939.74Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PEPC_SORUN2.687e-2940.61Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPA_BOVIN3.510e-2943.51Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
CHYM_CALJA5.987e-2940.91Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPA_PIG1.021e-2842.21Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01ah04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ah04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290339 ID=CB290339; Name=CB290339; organism=Citrus sinensis; type=EST; length=753bp
GCCGTTAAGCTTCCTTTACTTTGCTTCAAACTCAGCTTCAGCCGAAAACC
AAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGGG
TGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGA
ATTGGCTTGAAGAAGCGGCGACTAGATCTTCATAGTCTAAATGCTGCAAG
AATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGC
GCCATCGTTTGGGTGATTCAGATGAAGATATATTGCCTTTGAAGAACTTT
ATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCACAAAA
TTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCCATCTT
CAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACAAGTCC
AGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTA
TGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTG
GGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGG
AGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTT
CCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTG
AGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAGGGAT
CCA
back to top