CB290339

Overview
NameCB290339
Unique NameCB290339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.742e-28
Identity = 66/153 (43.14%), Postives = 92/153 (60.13%), Query Frame = 1
Query:  286 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            PL N+MD +YFG I IG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  +KS+T+    ++  I YG+GS++G                  F  +  E       + FDGI+GL +  I+   A PV+DNM  QGLVS+++FS +L+
Sbjct:   66 PLVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNMWNQGLVSQDLFSVYLS 217          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28
Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1
Query:  286 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRD 750
            PL+N++D  Y G I IG+PPQ FSV+FDTGSS+LWVPS  C  S +C  H  +    S+T+ + GKS ++ YGSG +SGF  Q              F  +  E    F  A FDGI+GL +  IA+     V DN+ +Q  +SE VF+F+L+ D
Sbjct:   67 PLRNYLDMVYVGNISIGTPPQQFSVVFDTGSSDLWVPSIYCK-SKACVTHRSFNPSHSSTFHDRGKSIKLEYGSGKMSGFLGQDTVRIGQLTSTGQAFGLSKEETGKAFEHAIFDGILGLAYPSIAIKGTTTVIDNLKKQDQISEPVFAFYLSSD 220          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.619e-28
Identity = 69/188 (36.70%), Postives = 99/188 (52.66%), Query Frame = 1
Query:  187 LNAARITRKERYMGGAGVSGVRHRLGDSDEDIL--PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            +   R T +E+ +    +    +RL  +D  I   PL+N++D  Y G I IG+PPQ F V+FDTGS+NLWVP   C  S +CY H  +  + S+++ E+G    I YGSG I GF                 F  +  E     L   FDGI+GL F  + + D +P++DN+   G  SE VF+F+LN
Sbjct:   24 MKTLRETLREKNLLNNFLEEQAYRLSKNDSKITIHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYGFDSL--PFDGILGLAFPAMGIEDTIPIFDNLWSHGAFSEPVFAFYLN 208          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.129e-27
Identity = 62/165 (37.58%), Postives = 96/165 (58.18%), Query Frame = 1
Query:  253 HRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNR 747
            H+  DS     P++N++D  Y G I +G+PPQ F VIFDTGS++LWVPS  C  S +C  H+ +   +S+T+   G+  ++ YG+G +SGF                 F  +  E      LA FDGI+GL +  ++V    PV+DN+  QGL+S+++F+F+L+R
Sbjct:   54 HKHADSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYC-SSPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLSVKGVTPVFDNLWNQGLLSQKLFAFYLSR 217          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 1
Query:  286 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLN 744
            PL N++D +YFG IGIG+P Q F+VIFDTGSSNLWVPS  C  S +C  H+R+  ++S+TY    ++  I YG+GS++G                  F +  T  GS  +  + FDGI+GL +  I+   A PV+DN+  Q LVS+++FS +L+
Sbjct:   66 PLVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYC-SSPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLY-YSPFDGILGLAYPSISSSGATPVFDNIWNQDLVSQDLFSVYLS 217          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 59/149 (39.60%), Postives = 89/149 (59.73%), Query Frame = 1
Query:  295 NFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL 741
            ++MDA YFG+I +G+PPQ+F V+FDTGSSNLWVPS  C  S++C  H+R+  R S+TY    +S  + YG+GS++G F                F  +  E    F+ A FDGI+GLG+  ++ G A      ++ +G +S+ +FS +L
Sbjct:   73 SYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYC-SSLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGYPGLSEGGATTAMQGLLREGALSQSLFSVYL 220          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26
Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 1
Query:  298 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL 741
            +MDA Y+GEI IG+PPQNF V+FDTGSSNLWV S  C  S +C  H+RY   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A      M+ +G +S+ +F  +L
Sbjct:   71 YMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYL 217          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26
Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1
Query:  289 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIE----ATREGSLTFLLARFDGIIGLGFREIAVGD-AVPVWDNMVEQGLVSEEVFSFWLNRD 750
            L ++ +AQY+G + IG+PPQNF V+FDTGSSNLWVP + C F  I+C  H+R+  +KS++ T  G S EI YG+GS+ G                    +    AT E  +TF+ A+FDGI G+G+  I+V   + P+        +   ++F+FWL+RD
Sbjct:   61 LSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRD 220          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26
Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 1
Query:  298 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWL 741
            +MDA YFGEI IG+PPQNF V+FDTGSSNLWV S  C  S +C  H+R+   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A      M+ +G +S+ +F  +L
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYL 217          
BLAST of CB290339 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.630e-26
Identity = 58/156 (37.18%), Postives = 91/156 (58.33%), Query Frame = 1
Query:  286 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDP 753
            P  N++D+ YFGEI IG+PPQNF ++FDTGSSNLWVPS+ C  S +C  H+R+   +S+TY    ++  + YG GS++                   F  +  E +  F  + FDGI+G+ +  +AV +   V  NM++QG +++ +FSF+ +  P
Sbjct:   65 PFTNYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTVLQNMMQQGQLTQPIFSFYFSPQP 219          
The following BLAST results are available for this feature:
BLAST of CB290339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
PEPA_SORUN1.742e-2843.14Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PAG2_PIG2.971e-2842.58Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
PAG2_BOVIN6.619e-2836.70Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]
PAG_HORSE1.129e-2737.58Pregnancy-associated glycoprotein OS=Equus caballu... [more]
PEPA_CALJA3.285e-2742.21Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPC_CAVPO4.290e-2739.60Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPC_MOUSE1.248e-2641.22Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
ASP3_CAEEL1.248e-2639.38Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPC_RAT1.630e-2641.22Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPB_CANFA1.630e-2637.18Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ah04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ah04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290339 ID=CB290339; Name=CB290339; organism=Citrus sinensis; type=EST; length=753bp
GCCGTTAAGCTTCCTTTACTTTGCTTCAAACTCAGCTTCAGCCGAAAACC
AAAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTTTATGGG
TGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTACGGAGA
ATTGGCTTGAAGAAGCGGCGACTAGATCTTCATAGTCTAAATGCTGCAAG
AATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTGGCGTGC
GCCATCGTTTGGGTGATTCAGATGAAGATATATTGCCTTTGAAGAACTTT
ATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCCACAAAA
TTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTCCATCTT
CAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTACAAGTCC
AGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAATAAACTA
TGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTGAAGTTG
GGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGAGAAGGG
AGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCTTGGGTT
CCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATATGGTTG
AGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAACAGGGAT
CCA
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