CB290341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_TRIGR (60S ribosomal protein L22 OS=Tripneustes gratilla GN=RPL22 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.147e-21 Identity = 52/107 (48.60%), Postives = 70/107 (65.42%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F I C PVED IMD ++ E+FLQERIKV GK L ++ + R+K+K+TVTS+ FS +N+RDWLRV+A+NK+ YELRYF I +++ EEED Sbjct: 25 FTIDCTLPVEDGIMDASNFEQFLQERIKVNGKTKNLTTNIVIERKKSKVTVTSEIAFSKRYLKYLTKKYLKKNNLRDWLRVVAANKES--YELRYFQINQDDEEEED 129
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_XENTR (60S ribosomal protein L22 OS=Xenopus tropicalis GN=rpl22 PE=2 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20 Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FL +RIKV GK G LG V++ R K+KITV+S+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_XENLA (60S ribosomal protein L22 OS=Xenopus laevis GN=rpl22 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.984e-20 Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F + C PVED IMD A+ E+FL +RIKV GK G LG V++ R K+KITV+S+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_DROME (60S ribosomal protein L22 OS=Drosophila melanogaster GN=RpL22 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 7.514e-19 Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 F I C ED IMD+A EK+++ R+KV GK LG++VT R K K+ V+SD +FS +++RDW+RV+A+ KD YELRYF I+ N+ E++D Sbjct: 193 FTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDS--YELRYFRISSNDDEDDD 297
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22L_XENTR (60S ribosomal protein L22-like 1 OS=Xenopus tropicalis GN=rpl22l1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.729e-18 Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 103 TFVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 426 +F + PVED I D + E+FL+ERIKV GK G LG V + R K+KITV+S+ FS +N+RDWLRV+AS D+ YELRYF I++++ E + Sbjct: 14 SFTLDLTHPVEDGIFDSVNFEQFLKERIKVNGKTGNLGSIVHIGRLKSKITVSSEKKFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDDESESE 119
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_GADMO (60S ribosomal protein L22 (Fragment) OS=Gadus morhua GN=rpl22 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGE 417 F + C PVED IMD A+ E+FLQERIKV GK+G LG+ V++ R +KI+V S+ FS +N+RDWLRV+A+ K+ YELRYF I ++E E Sbjct: 18 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKSGNLGNGVVSIERXXSKISVNSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEE 120
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22L_HUMAN (60S ribosomal protein L22-like 1 OS=Homo sapiens GN=RPL22L1 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.870e-18 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 127 PVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEE 423 PVED I D + E+FL+E++KV GK G LG+ V + R K KITV S+ FS +N+RDWLRV+AS D+ YELRYF I+++E E E Sbjct: 23 PVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDEDESE 119
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22L_MOUSE (60S ribosomal protein L22-like 1 OS=Mus musculus GN=Rpl22l1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.417e-17 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 127 PVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENE--GEEED 426 PVED I D + E+FL+E++KV GK G LG+ V + R K KITV S+ FS +N+RDWLRV+AS D+ YELRYF I+++E E ED Sbjct: 23 PVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERLKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDEDGSESED 122
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22_SCHPO (60S ribosomal protein L22 OS=Schizosaccharomyces pombe GN=rpl22 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.200e-16 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 106 FVIHCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRE-KTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEE 423 ++I V DKI D+A+ EK+L +RIKV GK G LG SV V+RE +KI V + +FS H++RDWLRV+++ K VYELRY+N+ EEE Sbjct: 12 YIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFSGRYLKYLTKKFLKKHSLRDWLRVVSTKK--GVYELRYYNVVVGNDEEE 116
BLAST of CB290341 vs. ExPASy Swiss-Prot
Match: RL22L_BOVIN (60S ribosomal protein L22-like 1 OS=Bos taurus GN=RPL22L1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.567e-16 Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 130 VEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEE 423 VED I D + E+FL+E++KV GK G LG+ V + R K KI V S+ FS +N+RDWLRV+AS D+ YELRYF I+++E E E Sbjct: 24 VEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKIIVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDEDESE 119 The following BLAST results are available for this feature:
BLAST of CB290341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290341 ID=CB290341; Name=CB290341; organism=Citrus sinensis; type=EST; length=661bpback to top |